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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0262000.1 4 Osa04LNG0262000 20708035-20709822 long non-coding(lnc) isoforms of known genes 1530 63.13725 2
Osa04LNT0247600.1 4 Osa04LNG0247600 2072362-2072726 intergenetic lncRNA (lincRNA) 282 49.29078 2
Osa04LNT0493900.1 4 Osa04LNG0493900 20777020-20777232 intergenetic lncRNA (lincRNA) 213 33.33333 1
Osa04LNT0262100.1 4 Osa04LNG0262100 20852260-20858102 long non-coding(lnc) isoforms of known genes 1828 45.02188 7
Osa04LNT0262200.1 4 Osa04LNG0262200 20941065-20948918 long non-coding(lnc) isoforms of known genes 3889 46.46439 14
Osa04LNT0494000.1 4 Osa04LNG0494000 21069668-21069949 intergenetic lncRNA (lincRNA) 282 28.36879 1
Osa04LNT0494100.1 4 Osa04LNG0494100 21069681-21069949 intergenetic lncRNA (lincRNA) 269 27.50929 1
Osa04LNT0262300.1 4 Osa04LNG0262300 21281751-21285018 long non-coding(lnc) isoforms of known genes 2047 56.91255 7
Osa04LNT0262400.1 4 Osa04LNG0262400 21361553-21365344 long non-coding(lnc) isoforms of known genes 2431 43.60346 4
Osa04LNT0262500.1 4 Osa04LNG0262500 21373106-21373615 Antisense lncRNA 391 55.49872 2
Osa04LNT0262600.1 4 Osa04LNG0262600 21385573-21387573 long non-coding(lnc) isoforms of known genes 814 56.01966 2
Osa04LNT0262800.1 4 Osa04LNG0262800 21428502-21435800 long non-coding(lnc) isoforms of known genes 1403 40.4134 11
Osa04LNT0262800.2 4 Osa04LNG0262800 21428502-21435800 long non-coding(lnc) isoforms of known genes 1114 56.64273 5
Osa04LNT0262700.1 4 Osa04LNG0262700 21496043-21498464 intergenetic lncRNA (lincRNA) 639 54.3036 3
Osa04LNT0262900.1 4 Osa04LNG0262900 21539457-21543560 long non-coding(lnc) isoforms of known genes 2807 47.20342 12
Osa04LNT0263000.1 4 Osa04LNG0263000 21609387-21620387 long non-coding(lnc) isoforms of known genes 3830 45.61358 25
Osa04LNT0263600.2 4 Osa04LNG0263600 21643962-21649239 long non-coding(lnc) isoforms of known genes 785 39.23567 4
Osa04LNT0263600.1 4 Osa04LNG0263600 21643962-21649239 long non-coding(lnc) isoforms of known genes 497 51.71026 2
Osa04LNT0263100.1 4 Osa04LNG0263100 21699925-21705660 long non-coding(lnc) isoforms of known genes 4630 49.07127 10
Osa04LNT0263200.1 4 Osa04LNG0263200 21706176-21712094 long non-coding(lnc) isoforms of known genes 2218 49.45897 7
Osa04LNT0263200.2 4 Osa04LNG0263200 21706176-21712094 long non-coding(lnc) isoforms of known genes 2306 49.34952 8
Osa04LNT0263200.3 4 Osa04LNG0263200 21706176-21712094 long non-coding(lnc) isoforms of known genes 2989 47.97591 6
Osa04LNT0263300.1 4 Osa04LNG0263300 21728708-21738222 long non-coding(lnc) isoforms of known genes 1902 44.6898 5
Osa04LNT0263400.1 4 Osa04LNG0263400 21752568-21758170 long non-coding(lnc) isoforms of known genes 2246 46.26002 11
Osa04LNT0263500.1 4 Osa04LNG0263500 21799231-21801625 long non-coding(lnc) isoforms of known genes 2247 48.90966 2