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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0269300.1 4 Osa04LNG0269300 24567146-24571583 long non-coding(lnc) isoforms of known genes 3080 48.99351 6
Osa04LNT0269300.3 4 Osa04LNG0269300 24567146-24571583 long non-coding(lnc) isoforms of known genes 3180 48.49057 6
Osa04LNT0269400.1 4 Osa04LNG0269400 24648004-24649307 sense lncRNA 1175 59.23404 2
Osa04LNT0269500.1 4 Osa04LNG0269500 24655178-24660067 long non-coding(lnc) isoforms of known genes 1177 52.93118 6
Osa04LNT0269600.1 4 Osa04LNG0269600 24672491-24673193 intergenetic lncRNA (lincRNA) 703 54.33855 1
Osa04LNT0269800.4 4 Osa04LNG0269800 24719614-24722706 long non-coding(lnc) isoforms of known genes 1811 43.78796 4
Osa04LNT0269800.1 4 Osa04LNG0269800 24719614-24722706 long non-coding(lnc) isoforms of known genes 1201 50.1249 5
Osa04LNT0269800.2 4 Osa04LNG0269800 24719614-24722706 long non-coding(lnc) isoforms of known genes 1156 50.43253 5
Osa04LNT0269800.3 4 Osa04LNG0269800 24719614-24722706 long non-coding(lnc) isoforms of known genes 1163 49.69905 5
Osa04LNT0269700.1 4 Osa04LNG0269700 24769728-24772998 sense lncRNA 1236 58.49515 4
Osa04LNT0269900.1 4 Osa04LNG0269900 24775540-24779534 sense lncRNA 1295 49.11197 7
Osa04LNT0270000.1 4 Osa04LNG0270000 24810332-24816262 long non-coding(lnc) isoforms of known genes 1310 65.26718 4
Osa04LNT0270100.2 4 Osa04LNG0270100 24841362-24843684 long non-coding(lnc) isoforms of known genes 1068 48.8764 4
Osa04LNT0270100.1 4 Osa04LNG0270100 24841362-24843684 long non-coding(lnc) isoforms of known genes 956 50.20921 5
Osa04LNT0270200.1 4 Osa04LNG0270200 24846908-24853939 long non-coding(lnc) isoforms of known genes 2877 46.26347 15
Osa04LNT0270300.1 4 Osa04LNG0270300 24936065-24938755 long non-coding(lnc) isoforms of known genes 1606 49.4396 6
Osa04LNT0270400.1 4 Osa04LNG0270400 24943121-24945408 long non-coding(lnc) isoforms of known genes 794 54.03023 5
Osa04LNT0270500.1 4 Osa04LNG0270500 24946272-24950195 long non-coding(lnc) isoforms of known genes 2651 44.36062 5
Osa04LNT0270600.1 4 Osa04LNG0270600 24983395-24986224 intergenetic lncRNA (lincRNA) 751 47.53662 3
Osa04LNT0270700.1 4 Osa04LNG0270700 25008080-25010015 long non-coding(lnc) isoforms of known genes 712 49.4382 4
Osa04LNT0270800.1 4 Osa04LNG0270800 25025234-25025965 intergenetic lncRNA (lincRNA) 732 48.22404 1
Osa04LNT0270900.1 4 Osa04LNG0270900 25060063-25061227 intergenetic lncRNA (lincRNA) 638 52.03762 4
Osa04LNT0271000.1 4 Osa04LNG0271000 25127343-25128415 long non-coding(lnc) isoforms of known genes 712 39.32584 2
Osa04LNT0271100.2 4 Osa04LNG0271100 25143868-25149592 long non-coding(lnc) isoforms of known genes 2439 45.26445 11
Osa04LNT0271100.1 4 Osa04LNG0271100 25143868-25149592 long non-coding(lnc) isoforms of known genes 2436 45.2381 11