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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0278300.1 4 Osa04LNG0278300 30388420-30390045 long non-coding(lnc) isoforms of known genes 1103 45.96555 5
Osa04LNT0278200.1 4 Osa04LNG0278200 30393180-30395724 sense lncRNA 1103 47.86945 2
Osa04LNT0278400.1 4 Osa04LNG0278400 30413491-30415745 long non-coding(lnc) isoforms of known genes 1411 51.8781 6
Osa04LNT0278500.1 4 Osa04LNG0278500 30416463-30424037 long non-coding(lnc) isoforms of known genes 3574 48.15333 17
Osa04LNT0278600.1 4 Osa04LNG0278600 30446412-30451385 long non-coding(lnc) isoforms of known genes 1063 53.80997 3
Osa04LNT0278800.1 4 Osa04LNG0278800 30463872-30473000 long non-coding(lnc) isoforms of known genes 3551 42.91749 22
Osa04LNT0278700.1 4 Osa04LNG0278700 30510983-30513871 long non-coding(lnc) isoforms of known genes 1949 48.33248 4
Osa04LNT0495400.1 4 Osa04LNG0495400 30618558-30618785 intergenetic lncRNA (lincRNA) 228 42.98246 1
Osa04LNT0484600.1 4 Osa04LNG0484600 3062826-3063067 intergenetic lncRNA (lincRNA) 242 23.55372 1
Osa04LNT0279000.1 4 Osa04LNG0279000 30629734-30638844 sense lncRNA 4112 47.15467 27
Osa04LNT0278900.1 4 Osa04LNG0278900 30642129-30645811 long non-coding(lnc) isoforms of known genes 2188 48.44607 5
Osa04LNT0279100.1 4 Osa04LNG0279100 30690638-30696668 long non-coding(lnc) isoforms of known genes 1930 45.28497 11
Osa04LNT0279100.2 4 Osa04LNG0279100 30690638-30696668 long non-coding(lnc) isoforms of known genes 1984 45.3125 11
Osa04LNT0279200.1 4 Osa04LNG0279200 30735429-30736297 Antisense lncRNA 762 43.83202 2
Osa04LNT0279300.1 4 Osa04LNG0279300 30764576-30770580 long non-coding(lnc) isoforms of known genes 1844 52.54881 13
Osa04LNT0279400.1 4 Osa04LNG0279400 30798891-30804829 long non-coding(lnc) isoforms of known genes 3338 48.53206 13
Osa04LNT0279500.1 4 Osa04LNG0279500 30875264-30879479 long non-coding(lnc) isoforms of known genes 3667 42.70521 4
Osa04LNT0279700.1 4 Osa04LNG0279700 30888156-30905210 long non-coding(lnc) isoforms of known genes 3101 43.27636 26
Osa04LNT0279800.1 4 Osa04LNG0279800 30905363-30907741 intergenetic lncRNA (lincRNA) 1334 60.34483 6
Osa04LNT0279600.2 4 Osa04LNG0279600 30908540-30913698 long non-coding(lnc) isoforms of known genes 3855 48.79377 8
Osa04LNT0279600.1 4 Osa04LNG0279600 30908540-30913698 long non-coding(lnc) isoforms of known genes 3759 49.24182 8
Osa04LNT0279900.2 4 Osa04LNG0279900 30920407-30925664 long non-coding(lnc) isoforms of known genes 3137 52.75741 9
Osa04LNT0279900.1 4 Osa04LNG0279900 30920407-30925664 long non-coding(lnc) isoforms of known genes 3205 52.35569 9
Osa04LNT0280000.1 4 Osa04LNG0280000 30945227-30948686 long non-coding(lnc) isoforms of known genes 1288 47.59317 10
Osa04LNT0280100.1 4 Osa04LNG0280100 30952520-30957572 long non-coding(lnc) isoforms of known genes 3470 45.27378 9