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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0495500.1 4 Osa04LNG0495500 32222796-32223000 intergenetic lncRNA (lincRNA) 205 24.87805 1
Osa04LNT0282400.1 4 Osa04LNG0282400 32240154-32240931 Antisense lncRNA 243 47.73663 3
Osa04LNT0282400.2 4 Osa04LNG0282400 32240154-32240931 Antisense lncRNA 398 63.06533 3
Osa04LNT0282500.1 4 Osa04LNG0282500 32278194-32281408 long non-coding(lnc) isoforms of known genes 1516 47.09763 6
Osa04LNT0495600.1 4 Osa04LNG0495600 32358112-32358347 intronic lncRNA 236 29.23729 1
Osa04LNT0282600.1 4 Osa04LNG0282600 32378707-32382044 long non-coding(lnc) isoforms of known genes 2784 48.02443 6
Osa04LNT0282700.1 4 Osa04LNG0282700 32390377-32392459 sense lncRNA 1946 57.91367 2
Osa04LNT0282800.1 4 Osa04LNG0282800 32459623-32460498 long non-coding(lnc) isoforms of known genes 779 54.30039 2
Osa04LNT0282900.1 4 Osa04LNG0282900 32473525-32474261 intergenetic lncRNA (lincRNA) 623 47.35152 2
Osa04LNT0283000.1 4 Osa04LNG0283000 32483088-32485898 long non-coding(lnc) isoforms of known genes 1382 50.79595 11
Osa04LNT0283100.1 4 Osa04LNG0283100 32582189-32585691 long non-coding(lnc) isoforms of known genes 1249 47.07766 10
Osa04LNT0283300.1 4 Osa04LNG0283300 32634024-32637813 long non-coding(lnc) isoforms of known genes 1121 47.90366 6
Osa04LNT0283200.1 4 Osa04LNG0283200 32671919-32675706 long non-coding(lnc) isoforms of known genes 3265 49.73966 6
Osa04LNT0484700.1 4 Osa04LNG0484700 3272757-3273031 intergenetic lncRNA (lincRNA) 275 27.63636 1
Osa04LNT0484800.1 4 Osa04LNG0484800 3272757-3273031 intergenetic lncRNA (lincRNA) 275 27.63636 1
Osa04LNT0283400.2 4 Osa04LNG0283400 32752500-32754677 Antisense lncRNA 598 53.51171 5
Osa04LNT0283400.1 4 Osa04LNG0283400 32752500-32754677 Antisense lncRNA 505 52.67327 4
Osa04LNT0283500.2 4 Osa04LNG0283500 32801074-32813162 long non-coding(lnc) isoforms of known genes 5112 45.89202 19
Osa04LNT0283500.1 4 Osa04LNG0283500 32801074-32813162 long non-coding(lnc) isoforms of known genes 5617 47.58768 19
Osa04LNT0283600.1 4 Osa04LNG0283600 32868115-32871622 long non-coding(lnc) isoforms of known genes 1917 46.89619 4
Osa04LNT0283600.2 4 Osa04LNG0283600 32868115-32871622 long non-coding(lnc) isoforms of known genes 1301 52.57494 5
Osa04LNT0283600.3 4 Osa04LNG0283600 32868115-32871622 long non-coding(lnc) isoforms of known genes 1001 50.54945 4
Osa04LNT0283600.4 4 Osa04LNG0283600 32868115-32871622 long non-coding(lnc) isoforms of known genes 1882 47.82147 4
Osa04LNT0283700.4 4 Osa04LNG0283700 32927309-32927649 intergenetic lncRNA (lincRNA) 572 54.54545 1
Osa04LNT0283700.1 4 Osa04LNG0283700 32927309-32927649 intergenetic lncRNA (lincRNA) 341 55.13196 1