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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0283700.3 4 Osa04LNG0283700 32927309-32927649 intergenetic lncRNA (lincRNA) 806 55.45906 1
Osa04LNT0283700.2 4 Osa04LNG0283700 32927309-32927649 intergenetic lncRNA (lincRNA) 838 55.13126 1
Osa04LNT0283900.1 4 Osa04LNG0283900 32933242-32937187 long non-coding(lnc) isoforms of known genes 3217 47.8396 2
Osa04LNT0283900.2 4 Osa04LNG0283900 32933242-32937187 long non-coding(lnc) isoforms of known genes 3701 45.63631 2
Osa04LNT0283800.1 4 Osa04LNG0283800 32940770-32943605 sense lncRNA 1765 44.13598 4
Osa04LNT0284000.1 4 Osa04LNG0284000 32946742-32947329 intergenetic lncRNA (lincRNA) 465 46.23656 2
Osa04LNT0284100.1 4 Osa04LNG0284100 32964169-32967591 Antisense lncRNA 345 60.57971 2
Osa04LNT0284300.1 4 Osa04LNG0284300 33071706-33071953 Antisense lncRNA 248 52.01613 1
Osa04LNT0284200.1 4 Osa04LNG0284200 33080151-33086821 sense lncRNA 1386 41.34199 4
Osa04LNT0284500.1 4 Osa04LNG0284500 33170286-33177295 long non-coding(lnc) isoforms of known genes 2137 43.28498 16
Osa04LNT0284400.1 4 Osa04LNG0284400 33199240-33199980 intronic lncRNA 741 51.417 1
Osa04LNT0284600.1 4 Osa04LNG0284600 33219427-33220437 long non-coding(lnc) isoforms of known genes 591 65.98985 3
Osa04LNT0495700.1 4 Osa04LNG0495700 33301728-33301962 intergenetic lncRNA (lincRNA) 235 28.51064 1
Osa04LNT0284700.1 4 Osa04LNG0284700 33415465-33416380 intergenetic lncRNA (lincRNA) 916 57.75109 1
Osa04LNT0284800.1 4 Osa04LNG0284800 33436982-33437797 sense lncRNA 666 60.21021 2
Osa04LNT0284900.1 4 Osa04LNG0284900 33499964-33506102 long non-coding(lnc) isoforms of known genes 1364 61.95015 4
Osa04LNT0285000.1 4 Osa04LNG0285000 33500671-33500872 intronic lncRNA 202 26.73267 1
Osa04LNT0285100.1 4 Osa04LNG0285100 33509861-33510358 intronic lncRNA 498 34.13655 1
Osa04LNT0285200.1 4 Osa04LNG0285200 33517229-33520052 long non-coding(lnc) isoforms of known genes 1872 43.21581 10
Osa04LNT0285300.1 4 Osa04LNG0285300 33524754-33528154 sense lncRNA 1398 47.56795 12
Osa04LNT0285400.1 4 Osa04LNG0285400 33575152-33579642 long non-coding(lnc) isoforms of known genes 1758 46.75768 12
Osa04LNT0285400.2 4 Osa04LNG0285400 33575152-33579642 long non-coding(lnc) isoforms of known genes 1774 46.78692 12
Osa04LNT0495800.1 4 Osa04LNG0495800 33661312-33661559 intronic lncRNA 248 25.80645 1
Osa04LNT0285500.1 4 Osa04LNG0285500 33707455-33719236 long non-coding(lnc) isoforms of known genes 4678 44.42069 24
Osa04LNT0285600.2 4 Osa04LNG0285600 33765000-33772377 long non-coding(lnc) isoforms of known genes 3914 46.09096 12