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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0289200.2 4 Osa04LNG0289200 35091689-35098335 long non-coding(lnc) isoforms of known genes 2377 48.04375 15
Osa04LNT0289200.1 4 Osa04LNG0289200 35091689-35098335 long non-coding(lnc) isoforms of known genes 2411 48.02986 15
Osa04LNT0289300.1 4 Osa04LNG0289300 35121117-35121943 long non-coding(lnc) isoforms of known genes 624 42.94872 3
Osa04LNT0289400.1 4 Osa04LNG0289400 35346591-35355861 long non-coding(lnc) isoforms of known genes 6524 47.07235 14
Osa04LNT0289500.2 4 Osa04LNG0289500 35383000-35393738 long non-coding(lnc) isoforms of known genes 5635 46.81455 12
Osa04LNT0289500.1 4 Osa04LNG0289500 35383000-35393738 long non-coding(lnc) isoforms of known genes 5656 46.83522 12
Osa04LNT0289600.1 4 Osa04LNG0289600 35415941-35416179 intronic lncRNA 239 27.61506 1
Osa04LNT0289800.3 4 Osa04LNG0289800 35423055-35426957 long non-coding(lnc) isoforms of known genes 1166 49.0566 9
Osa04LNT0289800.1 4 Osa04LNG0289800 35423055-35426957 long non-coding(lnc) isoforms of known genes 1161 49.00947 9
Osa04LNT0289800.2 4 Osa04LNG0289800 35423055-35426957 long non-coding(lnc) isoforms of known genes 1160 49.65517 8
Osa04LNT0289800.4 4 Osa04LNG0289800 35423055-35426957 long non-coding(lnc) isoforms of known genes 1162 49.05336 8
Osa04LNT0289700.1 4 Osa04LNG0289700 35430450-35432796 long non-coding(lnc) isoforms of known genes 2201 44.70695 2
Osa04LNT0289900.1 4 Osa04LNG0289900 35452104-35459864 long non-coding(lnc) isoforms of known genes 3377 48.29731 19
Osa04LNT0290000.1 4 Osa04LNG0290000 35481025-35481804 sense lncRNA 631 52.45642 2
Osa04LNT0290100.1 4 Osa04LNG0290100 35488972-35490861 long non-coding(lnc) isoforms of known genes 669 52.01794 2
Osa04LNT0248000.1 4 Osa04LNG0248000 3575397-3581555 long non-coding(lnc) isoforms of known genes 1503 45.37591 7
Osa04LNT0247900.1 4 Osa04LNG0247900 3603215-3605258 intergenetic lncRNA (lincRNA) 743 44.27995 4
Osa04LNT0484900.1 4 Osa04LNG0484900 3606533-3606732 intergenetic lncRNA (lincRNA) 200 44.0 1
Osa04LNT0248100.1 4 Osa04LNG0248100 3609053-3613579 long non-coding(lnc) isoforms of known genes 3006 52.59481 3
Osa04LNT0248200.1 4 Osa04LNG0248200 3618895-3628899 intergenetic lncRNA (lincRNA) 587 47.35945 4
Osa04LNT0485000.1 4 Osa04LNG0485000 3809723-3809925 intergenetic lncRNA (lincRNA) 203 31.52709 1
Osa04LNT0485100.1 4 Osa04LNG0485100 3894827-3895030 intergenetic lncRNA (lincRNA) 204 38.23529 1
Osa04LNT0485300.1 4 Osa04LNG0485300 4372974-4373218 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa04LNT0485200.1 4 Osa04LNG0485200 4372974-4373218 intergenetic lncRNA (lincRNA) 245 26.93878 1
Osa04LNT0485400.1 4 Osa04LNG0485400 4373286-4373560 intergenetic lncRNA (lincRNA) 275 26.18182 1