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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0485500.1 4 Osa04LNG0485500 4373286-4373560 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa04LNT0248300.2 4 Osa04LNG0248300 4382098-4385551 long non-coding(lnc) isoforms of known genes 2230 48.29596 5
Osa04LNT0248300.1 4 Osa04LNG0248300 4382098-4385551 long non-coding(lnc) isoforms of known genes 1691 53.22295 6
Osa04LNT0248400.1 4 Osa04LNG0248400 4508968-4513848 long non-coding(lnc) isoforms of known genes 1778 52.13723 3
Osa04LNT0485600.1 4 Osa04LNG0485600 4582471-4582744 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa04LNT0485700.1 4 Osa04LNG0485700 4582471-4582744 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa04LNT0485800.1 4 Osa04LNG0485800 4717673-4717947 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa04LNT0248500.1 4 Osa04LNG0248500 4771950-4772569 intergenetic lncRNA (lincRNA) 620 50.0 1
Osa04LNT0486000.1 4 Osa04LNG0486000 4910298-4910572 intergenetic lncRNA (lincRNA) 275 28.72727 1
Osa04LNT0485900.1 4 Osa04LNG0485900 4910298-4910572 intergenetic lncRNA (lincRNA) 275 28.72727 1
Osa04LNT0248600.1 4 Osa04LNG0248600 4917981-4921960 intergenetic lncRNA (lincRNA) 3980 43.51759 1
Osa04LNT0248700.1 4 Osa04LNG0248700 5040560-5042564 sense lncRNA 1387 44.05191 2
Osa04LNT0248800.1 4 Osa04LNG0248800 5116152-5120793 intergenetic lncRNA (lincRNA) 2238 38.73995 3
Osa04LNT0248900.1 4 Osa04LNG0248900 5164110-5165320 intronic lncRNA 863 33.25608 2
Osa04LNT0249000.1 4 Osa04LNG0249000 5165387-5165661 intronic lncRNA 275 24.72727 1
Osa04LNT0249100.1 4 Osa04LNG0249100 5165387-5165661 intronic lncRNA 275 24.72727 1
Osa04LNT0249200.1 4 Osa04LNG0249200 5167579-5170532 intergenetic lncRNA (lincRNA) 2298 40.07833 3
Osa04LNT0249300.1 4 Osa04LNG0249300 5291177-5306497 long non-coding(lnc) isoforms of known genes 2146 44.22181 21
Osa04LNT0249300.2 4 Osa04LNG0249300 5291177-5306497 long non-coding(lnc) isoforms of known genes 2162 44.31082 21
Osa04LNT0249400.1 4 Osa04LNG0249400 5380120-5381564 sense lncRNA 1079 61.63114 2
Osa04LNT0249500.1 4 Osa04LNG0249500 5417086-5417716 intergenetic lncRNA (lincRNA) 631 42.78922 1
Osa04LNT0249700.2 4 Osa04LNG0249700 5655847-5666489 long non-coding(lnc) isoforms of known genes 1716 44.17249 12
Osa04LNT0249700.1 4 Osa04LNG0249700 5655847-5666489 long non-coding(lnc) isoforms of known genes 1723 44.28323 12
Osa04LNT0249600.1 4 Osa04LNG0249600 5706720-5711050 intergenetic lncRNA (lincRNA) 876 43.26484 2
Osa04LNT0249800.1 4 Osa04LNG0249800 5712772-5713895 intergenetic lncRNA (lincRNA) 466 40.34335 3