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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa04LNT0245900.1 4 Osa04LNG0245900 715787-722218 long non-coding(lnc) isoforms of known genes 1866 46.73098 12
Osa04LNT0251100.1 4 Osa04LNG0251100 7201373-7201647 intergenetic lncRNA (lincRNA) 275 41.45455 1
Osa04LNT0251200.1 4 Osa04LNG0251200 7380329-7381190 intergenetic lncRNA (lincRNA) 862 53.48028 1
Osa04LNT0483000.1 4 Osa04LNG0483000 744915-745186 intergenetic lncRNA (lincRNA) 272 27.94118 1
Osa04LNT0482900.1 4 Osa04LNG0482900 744915-745186 intergenetic lncRNA (lincRNA) 272 27.94118 1
Osa04LNT0486600.1 4 Osa04LNG0486600 7495762-7496017 intergenetic lncRNA (lincRNA) 256 25.78125 1
Osa04LNT0486500.1 4 Osa04LNG0486500 7495762-7496017 intergenetic lncRNA (lincRNA) 256 25.78125 1
Osa04LNT0251300.1 4 Osa04LNG0251300 7498137-7499038 intergenetic lncRNA (lincRNA) 902 55.32151 1
Osa04LNT0486700.1 4 Osa04LNG0486700 7602135-7602342 intergenetic lncRNA (lincRNA) 208 49.51923 1
Osa04LNT0251400.1 4 Osa04LNG0251400 7873528-7876305 long non-coding(lnc) isoforms of known genes 2090 41.05263 3
Osa04LNT0251500.1 4 Osa04LNG0251500 7891070-7891272 intergenetic lncRNA (lincRNA) 203 22.6601 1
Osa04LNT0251600.1 4 Osa04LNG0251600 7893523-7901781 long non-coding(lnc) isoforms of known genes 3834 46.81794 3
Osa04LNT0246100.1 4 Osa04LNG0246100 793567-799305 long non-coding(lnc) isoforms of known genes 2880 48.54167 3
Osa04LNT0246100.2 4 Osa04LNG0246100 793567-799305 long non-coding(lnc) isoforms of known genes 2693 49.31303 4
Osa04LNT0251700.1 4 Osa04LNG0251700 7939747-7943929 intergenetic lncRNA (lincRNA) 1214 52.22405 8
Osa04LNT0251700.2 4 Osa04LNG0251700 7939747-7943929 intergenetic lncRNA (lincRNA) 2001 45.22739 7
Osa04LNT0486800.1 4 Osa04LNG0486800 7996920-7997145 intronic lncRNA 226 49.11504 1
Osa04LNT0251800.1 4 Osa04LNG0251800 8031370-8038086 long non-coding(lnc) isoforms of known genes 6273 46.56464 2
Osa04LNT0252000.1 4 Osa04LNG0252000 8083780-8090694 long non-coding(lnc) isoforms of known genes 3818 45.46883 9
Osa04LNT0252000.4 4 Osa04LNG0252000 8083780-8090694 long non-coding(lnc) isoforms of known genes 1779 42.552 6
Osa04LNT0252000.3 4 Osa04LNG0252000 8083780-8090694 long non-coding(lnc) isoforms of known genes 3154 45.21243 8
Osa04LNT0252000.2 4 Osa04LNG0252000 8083780-8090694 long non-coding(lnc) isoforms of known genes 4260 48.35681 10
Osa04LNT0251900.1 4 Osa04LNG0251900 8117548-8126285 long non-coding(lnc) isoforms of known genes 3511 49.4446 10
Osa04LNT0252100.1 4 Osa04LNG0252100 8216513-8233268 long non-coding(lnc) isoforms of known genes 2322 44.65978 23
Osa04LNT0252200.1 4 Osa04LNG0252200 8267100-8268818 sense lncRNA 1387 63.66258 2