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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0302000.1 5 Osa05LNG0302000 13385142-13391031 long non-coding(lnc) isoforms of known genes 2547 44.91559 16
Osa05LNT0292000.1 5 Osa05LNG0292000 1340213-1341131 intergenetic lncRNA (lincRNA) 919 51.14255 1
Osa05LNT0302100.1 5 Osa05LNG0302100 13421645-13424003 sense lncRNA 1894 50.21119 2
Osa05LNT0302100.2 5 Osa05LNG0302100 13421645-13424003 sense lncRNA 1854 50.48544 2
Osa05LNT0292100.2 5 Osa05LNG0292100 1348492-1355035 long non-coding(lnc) isoforms of known genes 2108 44.02277 9
Osa05LNT0292100.1 5 Osa05LNG0292100 1348492-1355035 long non-coding(lnc) isoforms of known genes 2122 44.53346 10
Osa05LNT0302200.1 5 Osa05LNG0302200 13491695-13492286 intergenetic lncRNA (lincRNA) 592 40.87838 1
Osa05LNT0302300.1 5 Osa05LNG0302300 13511797-13521191 intergenetic lncRNA (lincRNA) 1984 36.69355 7
Osa05LNT0302500.1 5 Osa05LNG0302500 13543055-13547500 long non-coding(lnc) isoforms of known genes 1302 48.3871 8
Osa05LNT0302500.2 5 Osa05LNG0302500 13543055-13547500 long non-coding(lnc) isoforms of known genes 1321 48.06964 8
Osa05LNT0302400.1 5 Osa05LNG0302400 13554176-13556181 intergenetic lncRNA (lincRNA) 2006 53.83848 1
Osa05LNT0290300.1 5 Osa05LNG0290300 136808-143130 sense lncRNA 5659 41.03198 2
Osa05LNT0302600.1 5 Osa05LNG0302600 13709153-13711842 long non-coding(lnc) isoforms of known genes 912 62.0614 3
Osa05LNT0517900.1 5 Osa05LNG0517900 13712361-13712635 intergenetic lncRNA (lincRNA) 275 28.0 1
Osa05LNT0518000.1 5 Osa05LNG0518000 13712361-13712635 intergenetic lncRNA (lincRNA) 275 28.0 1
Osa05LNT0302700.1 5 Osa05LNG0302700 13755513-13763437 long non-coding(lnc) isoforms of known genes 1996 53.45691 8
Osa05LNT0302800.1 5 Osa05LNG0302800 13791123-13791973 intergenetic lncRNA (lincRNA) 851 37.01528 1
Osa05LNT0518100.1 5 Osa05LNG0518100 13792598-13792800 intergenetic lncRNA (lincRNA) 203 22.6601 1
Osa05LNT0302900.1 5 Osa05LNG0302900 13823209-13828651 long non-coding(lnc) isoforms of known genes 1315 52.69962 7
Osa05LNT0303000.2 5 Osa05LNG0303000 13939740-13946493 long non-coding(lnc) isoforms of known genes 3052 50.62254 6
Osa05LNT0303000.1 5 Osa05LNG0303000 13939740-13946493 long non-coding(lnc) isoforms of known genes 1956 47.34151 8
Osa05LNT0292200.1 5 Osa05LNG0292200 1397320-1404503 long non-coding(lnc) isoforms of known genes 3316 43.39566 10
Osa05LNT0303200.1 5 Osa05LNG0303200 14294833-14297297 sense lncRNA 2359 41.54303 2
Osa05LNT0303100.1 5 Osa05LNG0303100 14309615-14310154 intergenetic lncRNA (lincRNA) 540 56.66667 1
Osa05LNT0303300.1 5 Osa05LNG0303300 14427905-14432505 long non-coding(lnc) isoforms of known genes 3570 49.7479 6