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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0040000.1 1 Osa01LNG0040000 32586928-32591875 long non-coding(lnc) isoforms of known genes 1722 50.29036 6
Osa01LNT0040100.2 1 Osa01LNG0040100 32598097-32601804 long non-coding(lnc) isoforms of known genes 1271 48.22974 6
Osa01LNT0040100.1 1 Osa01LNG0040100 32598097-32601804 long non-coding(lnc) isoforms of known genes 1373 47.05025 5
Osa01LNT0040200.1 1 Osa01LNG0040200 32660519-32667347 long non-coding(lnc) isoforms of known genes 3160 47.1519 17
Osa01LNT0040300.2 1 Osa01LNG0040300 32676081-32681406 long non-coding(lnc) isoforms of known genes 2305 46.68113 14
Osa01LNT0040300.1 1 Osa01LNG0040300 32676081-32681406 long non-coding(lnc) isoforms of known genes 2636 44.15781 14
Osa01LNT0040300.3 1 Osa01LNG0040300 32676081-32681406 long non-coding(lnc) isoforms of known genes 2606 45.01151 13
Osa01LNT0040400.1 1 Osa01LNG0040400 32751201-32751410 intronic lncRNA 210 50.47619 1
Osa01LNT0040500.1 1 Osa01LNG0040500 32759126-32764797 long non-coding(lnc) isoforms of known genes 3549 44.23781 7
Osa01LNT0040700.1 1 Osa01LNG0040700 32773442-32783794 long non-coding(lnc) isoforms of known genes 4416 45.24457 14
Osa01LNT0040600.1 1 Osa01LNG0040600 32788491-32791466 long non-coding(lnc) isoforms of known genes 1942 59.93821 3
Osa01LNT0040600.2 1 Osa01LNG0040600 32788491-32791466 long non-coding(lnc) isoforms of known genes 2400 57.41667 3
Osa01LNT0040800.1 1 Osa01LNG0040800 32810952-32819425 long non-coding(lnc) isoforms of known genes 3743 48.16992 14
Osa01LNT0040900.1 1 Osa01LNG0040900 32855435-32858093 long non-coding(lnc) isoforms of known genes 878 60.25057 4
Osa01LNT0041200.1 1 Osa01LNG0041200 32900885-32907645 sense lncRNA 409 74.32763 2
Osa01LNT0041300.1 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 3819 42.47185 32
Osa01LNT0041300.2 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 4902 40.45288 30
Osa01LNT0041300.3 1 Osa01LNG0041300 32903045-32925673 long non-coding(lnc) isoforms of known genes 4633 41.31232 31
Osa01LNT0041000.1 1 Osa01LNG0041000 32929073-32932791 long non-coding(lnc) isoforms of known genes 1348 47.84866 8
Osa01LNT0041100.1 1 Osa01LNG0041100 32956325-32956524 intergenetic lncRNA (lincRNA) 200 47.0 1
Osa01LNT0041400.1 1 Osa01LNG0041400 33000078-33010217 long non-coding(lnc) isoforms of known genes 5110 42.83757 12
Osa01LNT0041700.1 1 Osa01LNG0041700 33145928-33152519 long non-coding(lnc) isoforms of known genes 2619 47.42268 9
Osa01LNT0041800.1 1 Osa01LNG0041800 33147601-33153350 sense lncRNA 470 55.10638 2
Osa01LNT0041500.1 1 Osa01LNG0041500 33154311-33158317 long non-coding(lnc) isoforms of known genes 863 45.88644 3
Osa01LNT0041600.1 1 Osa01LNG0041600 33195216-33196426 intergenetic lncRNA (lincRNA) 891 43.32211 2