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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0519400.1 5 Osa05LNG0519400 18608281-18608535 intergenetic lncRNA (lincRNA) 255 28.23529 1
Osa05LNT0519500.1 5 Osa05LNG0519500 18608281-18608535 intergenetic lncRNA (lincRNA) 255 28.23529 1
Osa05LNT0519600.1 5 Osa05LNG0519600 18608307-18608509 intergenetic lncRNA (lincRNA) 203 28.57143 1
Osa05LNT0292500.1 5 Osa05LNG0292500 1885155-1888846 long non-coding(lnc) isoforms of known genes 1334 44.52774 4
Osa05LNT0308300.1 5 Osa05LNG0308300 18969361-18969564 Antisense lncRNA 204 39.21569 1
Osa05LNT0308400.1 5 Osa05LNG0308400 19056526-19067981 sense lncRNA 4680 50.9188 15
Osa05LNT0308500.2 5 Osa05LNG0308500 19217268-19224289 long non-coding(lnc) isoforms of known genes 4161 54.84259 9
Osa05LNT0308500.4 5 Osa05LNG0308500 19217268-19224289 long non-coding(lnc) isoforms of known genes 2266 42.63019 7
Osa05LNT0308500.1 5 Osa05LNG0308500 19217268-19224289 long non-coding(lnc) isoforms of known genes 4826 54.5172 9
Osa05LNT0308500.3 5 Osa05LNG0308500 19217268-19224289 long non-coding(lnc) isoforms of known genes 4060 54.60591 8
Osa05LNT0292600.1 5 Osa05LNG0292600 1924276-1927242 long non-coding(lnc) isoforms of known genes 990 54.44444 7
Osa05LNT0308600.1 5 Osa05LNG0308600 19336642-19340835 long non-coding(lnc) isoforms of known genes 3508 40.02281 3
Osa05LNT0308600.2 5 Osa05LNG0308600 19336642-19340835 long non-coding(lnc) isoforms of known genes 1026 49.7076 4
Osa05LNT0308600.3 5 Osa05LNG0308600 19336642-19340835 long non-coding(lnc) isoforms of known genes 2445 40.4908 3
Osa05LNT0308700.1 5 Osa05LNG0308700 19346175-19353382 long non-coding(lnc) isoforms of known genes 2459 48.80033 13
Osa05LNT0308800.1 5 Osa05LNG0308800 19363757-19365922 sense lncRNA 1183 43.36433 3
Osa05LNT0308900.1 5 Osa05LNG0308900 19368978-19373894 long non-coding(lnc) isoforms of known genes 1418 44.64034 13
Osa05LNT0519700.1 5 Osa05LNG0519700 19394188-19394431 intergenetic lncRNA (lincRNA) 244 24.59016 1
Osa05LNT0519800.1 5 Osa05LNG0519800 19438080-19438327 intergenetic lncRNA (lincRNA) 248 25.40323 1
Osa05LNT0309000.1 5 Osa05LNG0309000 19609681-19622106 long non-coding(lnc) isoforms of known genes 3023 43.76447 17
Osa05LNT0309100.1 5 Osa05LNG0309100 19624387-19624776 intergenetic lncRNA (lincRNA) 390 66.41026 1
Osa05LNT0309200.1 5 Osa05LNG0309200 19702828-19704986 sense lncRNA 922 50.65076 2
Osa05LNT0309300.1 5 Osa05LNG0309300 19739932-19740208 intergenetic lncRNA (lincRNA) 277 74.72924 1
Osa05LNT0309400.1 5 Osa05LNG0309400 19780205-19784807 long non-coding(lnc) isoforms of known genes 2678 48.39432 10
Osa05LNT0309500.1 5 Osa05LNG0309500 19780994-19781963 long non-coding(lnc) isoforms of known genes 834 43.64508 2