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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0309600.1 5 Osa05LNG0309600 19784874-19785621 Antisense lncRNA 295 57.62712 2
Osa05LNT0309700.1 5 Osa05LNG0309700 19894399-19899925 long non-coding(lnc) isoforms of known genes 2597 53.09973 2
Osa05LNT0292700.1 5 Osa05LNG0292700 1998562-2002856 long non-coding(lnc) isoforms of known genes 2535 50.4931 6
Osa05LNT0309900.1 5 Osa05LNG0309900 20102713-20110677 long non-coding(lnc) isoforms of known genes 2475 40.0 11
Osa05LNT0310000.1 5 Osa05LNG0310000 20105088-20105291 intronic lncRNA 204 25.0 1
Osa05LNT0309800.1 5 Osa05LNG0309800 20154040-20156486 sense lncRNA 1873 53.44367 2
Osa05LNT0310100.1 5 Osa05LNG0310100 20243972-20247808 long non-coding(lnc) isoforms of known genes 2928 54.23497 9
Osa05LNT0310200.1 5 Osa05LNG0310200 20267977-20271119 long non-coding(lnc) isoforms of known genes 2379 44.64061 6
Osa05LNT0310200.3 5 Osa05LNG0310200 20267977-20271119 long non-coding(lnc) isoforms of known genes 2390 44.81172 6
Osa05LNT0310200.2 5 Osa05LNG0310200 20267977-20271119 long non-coding(lnc) isoforms of known genes 2373 44.62705 6
Osa05LNT0310300.2 5 Osa05LNG0310300 20278636-20282097 long non-coding(lnc) isoforms of known genes 2682 49.36614 3
Osa05LNT0310300.1 5 Osa05LNG0310300 20278636-20282097 long non-coding(lnc) isoforms of known genes 2679 49.34677 3
Osa05LNT0310400.1 5 Osa05LNG0310400 20414809-20418507 long non-coding(lnc) isoforms of known genes 1195 62.00837 3
Osa05LNT0310500.1 5 Osa05LNG0310500 20484964-20490119 long non-coding(lnc) isoforms of known genes 2019 49.13323 14
Osa05LNT0310600.1 5 Osa05LNG0310600 20568922-20573378 long non-coding(lnc) isoforms of known genes 1587 46.3138 7
Osa05LNT0310700.1 5 Osa05LNG0310700 20659890-20660950 intergenetic lncRNA (lincRNA) 975 45.74359 2
Osa05LNT0310800.1 5 Osa05LNG0310800 20728020-20735339 sense lncRNA 2373 44.45849 13
Osa05LNT0310800.2 5 Osa05LNG0310800 20728020-20735339 sense lncRNA 2541 41.00748 10
Osa05LNT0310900.1 5 Osa05LNG0310900 20816604-20820498 long non-coding(lnc) isoforms of known genes 2755 49.50998 4
Osa05LNT0520000.1 5 Osa05LNG0520000 20863367-20863640 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa05LNT0519900.1 5 Osa05LNG0519900 20863367-20863640 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa05LNT0311000.1 5 Osa05LNG0311000 20898521-20903638 long non-coding(lnc) isoforms of known genes 2412 49.25373 5
Osa05LNT0311100.2 5 Osa05LNG0311100 20944820-20951325 long non-coding(lnc) isoforms of known genes 3096 54.03747 10
Osa05LNT0311100.1 5 Osa05LNG0311100 20944820-20951325 long non-coding(lnc) isoforms of known genes 3680 53.125 11
Osa05LNT0311200.1 5 Osa05LNG0311200 21126879-21129643 long non-coding(lnc) isoforms of known genes 1431 48.07827 9