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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0311300.1 5 Osa05LNG0311300 21184600-21192934 long non-coding(lnc) isoforms of known genes 3328 51.89303 3
Osa05LNT0311400.1 5 Osa05LNG0311400 21231712-21232751 intergenetic lncRNA (lincRNA) 1040 61.25 1
Osa05LNT0292800.1 5 Osa05LNG0292800 2131194-2131737 intergenetic lncRNA (lincRNA) 544 58.27206 1
Osa05LNT0311500.1 5 Osa05LNG0311500 21342205-21345468 long non-coding(lnc) isoforms of known genes 1971 61.74531 7
Osa05LNT0520100.1 5 Osa05LNG0520100 21352189-21352449 intergenetic lncRNA (lincRNA) 261 28.35249 1
Osa05LNT0311600.1 5 Osa05LNG0311600 21415028-21420708 long non-coding(lnc) isoforms of known genes 1978 47.97776 14
Osa05LNT0311600.2 5 Osa05LNG0311600 21415028-21420708 long non-coding(lnc) isoforms of known genes 2688 44.60565 14
Osa05LNT0311700.2 5 Osa05LNG0311700 21451049-21457121 sense lncRNA 5987 42.20812 2
Osa05LNT0311700.1 5 Osa05LNG0311700 21451049-21457121 sense lncRNA 2567 45.07207 4
Osa05LNT0311800.1 5 Osa05LNG0311800 21567370-21571263 long non-coding(lnc) isoforms of known genes 1791 52.93132 3
Osa05LNT0311900.2 5 Osa05LNG0311900 21613710-21616111 long non-coding(lnc) isoforms of known genes 1857 42.11093 3
Osa05LNT0311900.1 5 Osa05LNG0311900 21613710-21616111 long non-coding(lnc) isoforms of known genes 1846 42.36186 3
Osa05LNT0311900.3 5 Osa05LNG0311900 21613710-21616111 long non-coding(lnc) isoforms of known genes 1465 44.7099 4
Osa05LNT0312000.1 5 Osa05LNG0312000 21699330-21703558 long non-coding(lnc) isoforms of known genes 1691 59.43229 4
Osa05LNT0312100.1 5 Osa05LNG0312100 21705751-21707209 sense lncRNA 841 50.05945 2
Osa05LNT0312300.1 5 Osa05LNG0312300 21889050-21893084 Antisense lncRNA 2650 39.66038 8
Osa05LNT0312300.2 5 Osa05LNG0312300 21889050-21893084 Antisense lncRNA 2141 40.72863 9
Osa05LNT0312200.1 5 Osa05LNG0312200 21894387-21896812 long non-coding(lnc) isoforms of known genes 2197 50.02276 3
Osa05LNT0312500.1 5 Osa05LNG0312500 21942980-21959335 long non-coding(lnc) isoforms of known genes 6458 44.73521 23
Osa05LNT0312400.1 5 Osa05LNG0312400 22033934-22038045 Antisense lncRNA 1041 41.69068 6
Osa05LNT0312400.2 5 Osa05LNG0312400 22033934-22038045 Antisense lncRNA 2210 37.55656 6
Osa05LNT0293000.2 5 Osa05LNG0293000 2204256-2207098 long non-coding(lnc) isoforms of known genes 1622 39.95068 2
Osa05LNT0293000.1 5 Osa05LNG0293000 2204256-2207098 long non-coding(lnc) isoforms of known genes 593 51.43339 3
Osa05LNT0292900.1 5 Osa05LNG0292900 2207519-2209503 intergenetic lncRNA (lincRNA) 912 45.39474 2
Osa05LNT0312600.1 5 Osa05LNG0312600 22160242-22162325 long non-coding(lnc) isoforms of known genes 905 53.92265 4