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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0316100.1 5 Osa05LNG0316100 24137727-24140854 long non-coding(lnc) isoforms of known genes 1228 54.39739 4
Osa05LNT0316200.2 5 Osa05LNG0316200 24154090-24158054 long non-coding(lnc) isoforms of known genes 1468 49.38692 7
Osa05LNT0316200.1 5 Osa05LNG0316200 24154090-24158054 long non-coding(lnc) isoforms of known genes 2046 44.96579 6
Osa05LNT0316300.2 5 Osa05LNG0316300 24453133-24469242 long non-coding(lnc) isoforms of known genes 3999 41.91048 7
Osa05LNT0316300.1 5 Osa05LNG0316300 24453133-24469242 long non-coding(lnc) isoforms of known genes 3981 41.8739 7
Osa05LNT0316400.1 5 Osa05LNG0316400 24540877-24544098 sense lncRNA 2137 49.9766 3
Osa05LNT0316500.1 5 Osa05LNG0316500 24552461-24555115 long non-coding(lnc) isoforms of known genes 1428 47.47899 6
Osa05LNT0316600.1 5 Osa05LNG0316600 24565176-24565997 Antisense lncRNA 397 38.03526 2
Osa05LNT0316700.1 5 Osa05LNG0316700 24589287-24593259 long non-coding(lnc) isoforms of known genes 2067 44.65409 8
Osa05LNT0316700.2 5 Osa05LNG0316700 24589287-24593259 long non-coding(lnc) isoforms of known genes 1548 49.4186 9
Osa05LNT0316800.1 5 Osa05LNG0316800 24674485-24676244 long non-coding(lnc) isoforms of known genes 1362 56.97504 5
Osa05LNT0316900.1 5 Osa05LNG0316900 24756592-24757536 intergenetic lncRNA (lincRNA) 733 50.20464 2
Osa05LNT0317000.1 5 Osa05LNG0317000 24785001-24785390 intergenetic lncRNA (lincRNA) 390 59.23077 1
Osa05LNT0520400.1 5 Osa05LNG0520400 24882962-24883176 intergenetic lncRNA (lincRNA) 215 25.11628 1
Osa05LNT0520600.1 5 Osa05LNG0520600 24889800-24890015 intergenetic lncRNA (lincRNA) 216 36.11111 1
Osa05LNT0520500.1 5 Osa05LNG0520500 24889800-24890015 intergenetic lncRNA (lincRNA) 216 36.11111 1
Osa05LNT0317100.1 5 Osa05LNG0317100 25041565-25043493 long non-coding(lnc) isoforms of known genes 1218 48.35796 6
Osa05LNT0520700.1 5 Osa05LNG0520700 25070964-25071209 intergenetic lncRNA (lincRNA) 246 25.20325 1
Osa05LNT0317200.1 5 Osa05LNG0317200 25193479-25197518 long non-coding(lnc) isoforms of known genes 537 52.70019 2
Osa05LNT0293500.1 5 Osa05LNG0293500 2528977-2536253 long non-coding(lnc) isoforms of known genes 2166 46.99908 19
Osa05LNT0317300.1 5 Osa05LNG0317300 25321363-25330862 long non-coding(lnc) isoforms of known genes 2015 45.65757 18
Osa05LNT0317400.1 5 Osa05LNG0317400 25781845-25788535 long non-coding(lnc) isoforms of known genes 3014 46.11812 20
Osa05LNT0317400.2 5 Osa05LNG0317400 25781845-25788535 long non-coding(lnc) isoforms of known genes 1414 43.77652 9
Osa05LNT0317500.1 5 Osa05LNG0317500 25788842-25793522 long non-coding(lnc) isoforms of known genes 3000 49.83333 8
Osa05LNT0293600.1 5 Osa05LNG0293600 2584804-2590111 long non-coding(lnc) isoforms of known genes 2792 52.68625 11