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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0041900.1 1 Osa01LNG0041900 33249300-33250376 long non-coding(lnc) isoforms of known genes 763 38.92529 3
Osa01LNT0004000.2 1 Osa01LNG0004000 3332952-3336035 long non-coding(lnc) isoforms of known genes 1381 46.63287 12
Osa01LNT0004000.1 1 Osa01LNG0004000 3332952-3336035 long non-coding(lnc) isoforms of known genes 1724 44.54756 11
Osa01LNT0461200.1 1 Osa01LNG0461200 33341332-33341584 intergenetic lncRNA (lincRNA) 253 43.083 1
Osa01LNT0042000.1 1 Osa01LNG0042000 33484564-33487837 long non-coding(lnc) isoforms of known genes 1865 44.7185 3
Osa01LNT0042100.1 1 Osa01LNG0042100 33502745-33504236 intergenetic lncRNA (lincRNA) 1492 35.85791 1
Osa01LNT0461300.1 1 Osa01LNG0461300 33562268-33562793 intergenetic lncRNA (lincRNA) 526 35.55133 1
Osa01LNT0042200.1 1 Osa01LNG0042200 33609436-33616252 long non-coding(lnc) isoforms of known genes 1869 47.99358 7
Osa01LNT0042300.1 1 Osa01LNG0042300 33703331-33704885 intergenetic lncRNA (lincRNA) 1555 53.37621 1
Osa01LNT0042400.1 1 Osa01LNG0042400 33705395-33706199 intergenetic lncRNA (lincRNA) 805 57.63975 1
Osa01LNT0042500.1 1 Osa01LNG0042500 33733124-33735425 long non-coding(lnc) isoforms of known genes 1037 49.66249 5
Osa01LNT0042600.1 1 Osa01LNG0042600 33816601-33821270 long non-coding(lnc) isoforms of known genes 3353 43.39398 2
Osa01LNT0004100.1 1 Osa01LNG0004100 3386766-3390803 long non-coding(lnc) isoforms of known genes 2577 47.30307 9
Osa01LNT0042700.1 1 Osa01LNG0042700 33952187-33956006 long non-coding(lnc) isoforms of known genes 2065 53.7046 5
Osa01LNT0461400.1 1 Osa01LNG0461400 34106523-34106817 intergenetic lncRNA (lincRNA) 295 43.38983 1
Osa01LNT0042800.1 1 Osa01LNG0042800 34153520-34159963 long non-coding(lnc) isoforms of known genes 2808 45.65527 12
Osa01LNT0043000.1 1 Osa01LNG0043000 34176198-34179807 long non-coding(lnc) isoforms of known genes 983 49.44049 8
Osa01LNT0042900.1 1 Osa01LNG0042900 34256800-34258347 intergenetic lncRNA (lincRNA) 1548 43.08786 1
Osa01LNT0043100.1 1 Osa01LNG0043100 34295651-34299876 long non-coding(lnc) isoforms of known genes 763 51.90039 2
Osa01LNT0043200.1 1 Osa01LNG0043200 34295788-34297945 Antisense lncRNA 1674 44.26523 2
Osa01LNT0043300.1 1 Osa01LNG0043300 34306542-34313315 long non-coding(lnc) isoforms of known genes 2154 47.91086 11
Osa01LNT0461500.1 1 Osa01LNG0461500 34361360-34361616 intergenetic lncRNA (lincRNA) 257 28.79377 1
Osa01LNT0043400.1 1 Osa01LNG0043400 34427866-34432457 Antisense lncRNA 455 56.26374 3
Osa01LNT0043500.1 1 Osa01LNG0043500 34458172-34463288 long non-coding(lnc) isoforms of known genes 367 55.58583 3
Osa01LNT0043600.1 1 Osa01LNG0043600 34485352-34489812 long non-coding(lnc) isoforms of known genes 1736 52.13134 9