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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa10LNT0070900.1 10 Osa10LNG0070900 14441451-14443188 intergenetic lncRNA (lincRNA) 967 41.05481 3
Osa10LNT0071000.2 10 Osa10LNG0071000 14474829-14478809 long non-coding(lnc) isoforms of known genes 1480 48.04054 10
Osa10LNT0071000.1 10 Osa10LNG0071000 14474829-14478809 long non-coding(lnc) isoforms of known genes 1497 47.96259 10
Osa10LNT0071100.1 10 Osa10LNG0071100 14513272-14520385 long non-coding(lnc) isoforms of known genes 3706 41.7701 2
Osa10LNT0060100.1 10 Osa10LNG0060100 1458094-1458762 intergenetic lncRNA (lincRNA) 669 42.15247 1
Osa10LNT0071200.1 10 Osa10LNG0071200 14662495-14663728 intergenetic lncRNA (lincRNA) 1234 57.13128 1
Osa10LNT0071300.1 10 Osa10LNG0071300 14741355-14741556 intronic lncRNA 202 36.63366 1
Osa10LNT0071400.3 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 1995 50.87719 4
Osa10LNT0071400.2 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 2088 50.09579 5
Osa10LNT0071400.1 10 Osa10LNG0071400 14746108-14750175 long non-coding(lnc) isoforms of known genes 2420 48.47107 4
Osa10LNT0071500.1 10 Osa10LNG0071500 14776372-14779039 long non-coding(lnc) isoforms of known genes 1295 47.18147 7
Osa10LNT0071700.1 10 Osa10LNG0071700 14869094-14872480 long non-coding(lnc) isoforms of known genes 2251 40.73745 5
Osa10LNT0071600.1 10 Osa10LNG0071600 14894291-14900908 sense lncRNA 4869 44.0953 4
Osa10LNT0071800.1 10 Osa10LNG0071800 14904210-14912952 long non-coding(lnc) isoforms of known genes 6867 43.1047 6
Osa10LNT0071800.2 10 Osa10LNG0071800 14904210-14912952 long non-coding(lnc) isoforms of known genes 6790 43.13697 6
Osa10LNT0071900.2 10 Osa10LNG0071900 14952758-14959713 long non-coding(lnc) isoforms of known genes 3773 43.28121 6
Osa10LNT0071900.1 10 Osa10LNG0071900 14952758-14959713 long non-coding(lnc) isoforms of known genes 3860 43.39378 5
Osa10LNT0574000.1 10 Osa10LNG0574000 15099345-15099562 intergenetic lncRNA (lincRNA) 218 48.16514 1
Osa10LNT0072000.1 10 Osa10LNG0072000 15191710-15194372 intergenetic lncRNA (lincRNA) 2524 39.02536 2
Osa10LNT0072100.1 10 Osa10LNG0072100 15220811-15223119 long non-coding(lnc) isoforms of known genes 1930 49.68912 3
Osa10LNT0072200.1 10 Osa10LNG0072200 15229583-15234593 long non-coding(lnc) isoforms of known genes 1655 51.72205 10
Osa10LNT0574100.1 10 Osa10LNG0574100 15278540-15278743 intergenetic lncRNA (lincRNA) 204 26.96078 1
Osa10LNT0060200.1 10 Osa10LNG0060200 1541239-1548037 long non-coding(lnc) isoforms of known genes 3359 44.83477 4
Osa10LNT0574200.1 10 Osa10LNG0574200 15513235-15513493 intergenetic lncRNA (lincRNA) 259 22.00772 1
Osa10LNT0072300.1 10 Osa10LNG0072300 15637609-15644400 long non-coding(lnc) isoforms of known genes 3038 49.04542 14
Osa10LNT0072400.1 10 Osa10LNG0072400 15689929-15693130 long non-coding(lnc) isoforms of known genes 1380 54.56522 11
Osa10LNT0072500.1 10 Osa10LNG0072500 15905329-15905600 intergenetic lncRNA (lincRNA) 272 72.42647 1
Osa10LNT0072600.1 10 Osa10LNG0072600 16084478-16086689 long non-coding(lnc) isoforms of known genes 1103 56.39166 5
Osa10LNT0072700.3 10 Osa10LNG0072700 16160566-16167894 long non-coding(lnc) isoforms of known genes 2826 50.03539 8
Osa10LNT0072700.2 10 Osa10LNG0072700 16160566-16167894 long non-coding(lnc) isoforms of known genes 2812 50.03556 8
Osa10LNT0072700.1 10 Osa10LNG0072700 16160566-16167894 long non-coding(lnc) isoforms of known genes 3967 45.62642 9
Osa10LNT0060300.1 10 Osa10LNG0060300 1631824-1634697 intergenetic lncRNA (lincRNA) 837 45.63919 3
Osa10LNT0072800.1 10 Osa10LNG0072800 16400111-16401593 intergenetic lncRNA (lincRNA) 1483 50.16858 1
Osa10LNT0072900.1 10 Osa10LNG0072900 16429083-16429924 sense lncRNA 782 55.24297 2
Osa10LNT0073000.1 10 Osa10LNG0073000 16665830-16673464 long non-coding(lnc) isoforms of known genes 1507 46.11812 10
Osa10LNT0073100.1 10 Osa10LNG0073100 16705082-16708492 long non-coding(lnc) isoforms of known genes 1186 55.64924 11
Osa10LNT0073200.1 10 Osa10LNG0073200 16736028-16737955 intergenetic lncRNA (lincRNA) 591 42.30118 6
Osa10LNT0574300.1 10 Osa10LNG0574300 16900501-16900744 intergenetic lncRNA (lincRNA) 244 38.52459 1
Osa10LNT0073300.1 10 Osa10LNG0073300 16981514-16989899 long non-coding(lnc) isoforms of known genes 1433 40.19539 5
Osa10LNT0060400.1 10 Osa10LNG0060400 1707619-1708347 intergenetic lncRNA (lincRNA) 633 40.60032 2
Osa10LNT0073400.1 10 Osa10LNG0073400 17089181-17090002 intergenetic lncRNA (lincRNA) 822 47.56691 1
Osa10LNT0073500.1 10 Osa10LNG0073500 17158126-17162522 long non-coding(lnc) isoforms of known genes 2627 42.13932 4
Osa10LNT0073500.3 10 Osa10LNG0073500 17158126-17162522 long non-coding(lnc) isoforms of known genes 3712 40.30172 3
Osa10LNT0073500.2 10 Osa10LNG0073500 17158126-17162522 long non-coding(lnc) isoforms of known genes 2174 44.34223 4
Osa10LNT0073600.1 10 Osa10LNG0073600 17184397-17185866 sense lncRNA 735 59.72789 2
Osa10LNT0073700.1 10 Osa10LNG0073700 17192343-17195661 long non-coding(lnc) isoforms of known genes 2718 49.37454 3
Osa10LNT0073700.2 10 Osa10LNG0073700 17192343-17195661 long non-coding(lnc) isoforms of known genes 2463 49.73609 4
Osa10LNT0060500.1 10 Osa10LNG0060500 1729343-1740063 long non-coding(lnc) isoforms of known genes 2660 47.44361 9
Osa10LNT0574400.1 10 Osa10LNG0574400 17293863-17294137 intergenetic lncRNA (lincRNA) 275 24.72727 1
Osa10LNT0574500.1 10 Osa10LNG0574500 17293863-17294137 intergenetic lncRNA (lincRNA) 275 24.72727 1