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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0294400.1 5 Osa05LNG0294400 2892746-2898791 long non-coding(lnc) isoforms of known genes 5255 40.8373 2
Osa05LNT0294400.2 5 Osa05LNG0294400 2892746-2898791 long non-coding(lnc) isoforms of known genes 5121 40.89045 3
Osa05LNT0322400.1 5 Osa05LNG0322400 28960225-28965678 long non-coding(lnc) isoforms of known genes 2105 41.80523 16
Osa05LNT0521200.1 5 Osa05LNG0521200 28982932-28983148 intergenetic lncRNA (lincRNA) 217 25.34562 1
Osa05LNT0294500.3 5 Osa05LNG0294500 2906339-2913774 long non-coding(lnc) isoforms of known genes 3174 45.71519 15
Osa05LNT0294500.2 5 Osa05LNG0294500 2906339-2913774 long non-coding(lnc) isoforms of known genes 3035 45.53542 16
Osa05LNT0294500.1 5 Osa05LNG0294500 2906339-2913774 long non-coding(lnc) isoforms of known genes 3141 45.71792 15
Osa05LNT0322500.1 5 Osa05LNG0322500 29257818-29262204 long non-coding(lnc) isoforms of known genes 3144 53.97583 7
Osa05LNT0322600.1 5 Osa05LNG0322600 29271392-29274798 long non-coding(lnc) isoforms of known genes 2271 45.48657 3
Osa05LNT0322700.1 5 Osa05LNG0322700 29281652-29284348 sense lncRNA 1589 45.87791 6
Osa05LNT0322800.1 5 Osa05LNG0322800 29284596-29286853 long non-coding(lnc) isoforms of known genes 1423 64.5116 5
Osa05LNT0322900.1 5 Osa05LNG0322900 29293506-29304267 long non-coding(lnc) isoforms of known genes 6386 40.46351 16
Osa05LNT0322900.2 5 Osa05LNG0322900 29293506-29304267 long non-coding(lnc) isoforms of known genes 5402 39.59645 9
Osa05LNT0521400.1 5 Osa05LNG0521400 29418798-29419071 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa05LNT0521300.1 5 Osa05LNG0521300 29418798-29419071 intergenetic lncRNA (lincRNA) 274 31.0219 1
Osa05LNT0323000.1 5 Osa05LNG0323000 29488014-29492018 Antisense lncRNA 661 41.45234 2
Osa05LNT0323100.1 5 Osa05LNG0323100 29571146-29575990 long non-coding(lnc) isoforms of known genes 2322 47.37295 16
Osa05LNT0323200.1 5 Osa05LNG0323200 29618234-29622923 long non-coding(lnc) isoforms of known genes 1557 46.37123 13
Osa05LNT0323300.1 5 Osa05LNG0323300 29652337-29653169 intergenetic lncRNA (lincRNA) 833 31.45258 1
Osa05LNT0323400.1 5 Osa05LNG0323400 29664055-29666544 long non-coding(lnc) isoforms of known genes 1999 40.27014 6
Osa05LNT0294600.1 5 Osa05LNG0294600 2970911-2972775 long non-coding(lnc) isoforms of known genes 1748 52.17391 2
Osa05LNT0323600.1 5 Osa05LNG0323600 29729419-29740775 long non-coding(lnc) isoforms of known genes 3083 44.11288 25
Osa05LNT0323500.1 5 Osa05LNG0323500 29759285-29761472 long non-coding(lnc) isoforms of known genes 2059 55.94949 2
Osa05LNT0323700.1 5 Osa05LNG0323700 29765669-29767226 intergenetic lncRNA (lincRNA) 841 43.1629 2
Osa05LNT0512100.1 5 Osa05LNG0512100 3128856-3129056 intergenetic lncRNA (lincRNA) 201 48.25871 1