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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa05LNT0512200.1 5 Osa05LNG0512200 3166046-3166315 intergenetic lncRNA (lincRNA) 270 54.07407 1
Osa05LNT0512300.1 5 Osa05LNG0512300 3173777-3174050 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa05LNT0512400.1 5 Osa05LNG0512400 3173777-3174050 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa05LNT0294700.1 5 Osa05LNG0294700 3189795-3195510 long non-coding(lnc) isoforms of known genes 2588 43.3153 5
Osa05LNT0294900.1 5 Osa05LNG0294900 3233024-3237383 long non-coding(lnc) isoforms of known genes 3177 45.89235 6
Osa05LNT0294800.1 5 Osa05LNG0294800 3251082-3256034 long non-coding(lnc) isoforms of known genes 2622 50.87719 11
Osa05LNT0295000.1 5 Osa05LNG0295000 3313455-3319824 long non-coding(lnc) isoforms of known genes 2203 50.0227 15
Osa05LNT0295100.1 5 Osa05LNG0295100 3348862-3352787 long non-coding(lnc) isoforms of known genes 2185 43.79863 10
Osa05LNT0295200.1 5 Osa05LNG0295200 3439304-3443769 long non-coding(lnc) isoforms of known genes 2324 46.21343 9
Osa05LNT0295300.1 5 Osa05LNG0295300 3499107-3507534 long non-coding(lnc) isoforms of known genes 1764 53.23129 5
Osa05LNT0295400.1 5 Osa05LNG0295400 3561007-3571391 long non-coding(lnc) isoforms of known genes 1779 51.88308 10
Osa05LNT0295500.1 5 Osa05LNG0295500 3652897-3653860 long non-coding(lnc) isoforms of known genes 660 43.63636 2
Osa05LNT0295600.1 5 Osa05LNG0295600 3704302-3714723 long non-coding(lnc) isoforms of known genes 7585 45.76137 13
Osa05LNT0295700.2 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5989 41.62631 7
Osa05LNT0295700.3 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5900 41.83051 8
Osa05LNT0295700.1 5 Osa05LNG0295700 3718368-3725411 long non-coding(lnc) isoforms of known genes 5027 41.0185 8
Osa05LNT0290800.1 5 Osa05LNG0290800 372788-375616 long non-coding(lnc) isoforms of known genes 1325 46.49057 5
Osa05LNT0295800.1 5 Osa05LNG0295800 3816363-3817092 Antisense lncRNA 475 46.73684 3
Osa05LNT0295900.1 5 Osa05LNG0295900 3876382-3972390 sense lncRNA 3597 39.67195 2
Osa05LNT0290200.1 5 Osa05LNG0290200 38790-47165 long non-coding(lnc) isoforms of known genes 4754 44.29954 23
Osa05LNT0512500.1 5 Osa05LNG0512500 4030998-4031276 intergenetic lncRNA (lincRNA) 279 56.98925 1
Osa05LNT0296000.1 5 Osa05LNG0296000 4096771-4100732 long non-coding(lnc) isoforms of known genes 1273 46.97565 11
Osa05LNT0290900.1 5 Osa05LNG0290900 421312-432965 long non-coding(lnc) isoforms of known genes 4636 44.21915 26
Osa05LNT0296100.1 5 Osa05LNG0296100 4309927-4310629 intergenetic lncRNA (lincRNA) 620 53.06452 2
Osa05LNT0296200.1 5 Osa05LNG0296200 4801878-4803277 intergenetic lncRNA (lincRNA) 1400 57.64286 1