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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0502500.1 6 Osa06LNG0502500 13370957-13371225 intergenetic lncRNA (lincRNA) 269 29.73978 1
Osa06LNT0502400.1 6 Osa06LNG0502400 13370957-13371225 intergenetic lncRNA (lincRNA) 269 29.73978 1
Osa06LNT0341700.1 6 Osa06LNG0341700 13375606-13385094 intergenetic lncRNA (lincRNA) 920 45.1087 2
Osa06LNT0502700.1 6 Osa06LNG0502700 13470797-13471029 intergenetic lncRNA (lincRNA) 233 24.8927 1
Osa06LNT0502600.1 6 Osa06LNG0502600 13470797-13471029 intergenetic lncRNA (lincRNA) 233 24.8927 1
Osa06LNT0502900.1 6 Osa06LNG0502900 13471099-13471373 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa06LNT0502800.1 6 Osa06LNG0502800 13471099-13471373 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa06LNT0325200.1 6 Osa06LNG0325200 1349802-1358953 long non-coding(lnc) isoforms of known genes 550 46.36364 3
Osa06LNT0341800.1 6 Osa06LNG0341800 13514718-13521719 long non-coding(lnc) isoforms of known genes 1882 46.59936 12
Osa06LNT0341900.1 6 Osa06LNG0341900 13602068-13604906 long non-coding(lnc) isoforms of known genes 2547 48.9203 4
Osa06LNT0503000.1 6 Osa06LNG0503000 13606856-13607110 intergenetic lncRNA (lincRNA) 255 27.84314 1
Osa06LNT0503200.1 6 Osa06LNG0503200 13646397-13646641 intergenetic lncRNA (lincRNA) 245 26.12245 1
Osa06LNT0503100.1 6 Osa06LNG0503100 13646397-13646641 intergenetic lncRNA (lincRNA) 245 26.12245 1
Osa06LNT0342000.1 6 Osa06LNG0342000 13677508-13681870 long non-coding(lnc) isoforms of known genes 909 50.49505 4
Osa06LNT0325300.1 6 Osa06LNG0325300 1371096-1373671 Antisense lncRNA 881 52.09989 3
Osa06LNT0342200.2 6 Osa06LNG0342200 13723595-13730079 intergenetic lncRNA (lincRNA) 1104 47.64493 3
Osa06LNT0342200.1 6 Osa06LNG0342200 13723595-13730079 sense lncRNA 4198 52.23916 3
Osa06LNT0325400.1 6 Osa06LNG0325400 1373898-1374727 Antisense lncRNA 380 51.05263 4
Osa06LNT0342100.1 6 Osa06LNG0342100 13751154-13751858 intergenetic lncRNA (lincRNA) 432 42.59259 2
Osa06LNT0325500.1 6 Osa06LNG0325500 1385845-1388026 Antisense lncRNA 252 50.0 3
Osa06LNT0342300.1 6 Osa06LNG0342300 13886690-13888915 long non-coding(lnc) isoforms of known genes 658 40.88146 4
Osa06LNT0342400.2 6 Osa06LNG0342400 13888929-13889619 long non-coding(lnc) isoforms of known genes 498 73.69478 3
Osa06LNT0342400.1 6 Osa06LNG0342400 13888929-13889619 long non-coding(lnc) isoforms of known genes 621 75.52335 2
Osa06LNT0503400.1 6 Osa06LNG0503400 13890051-13890358 intergenetic lncRNA (lincRNA) 308 24.35065 1
Osa06LNT0503300.1 6 Osa06LNG0503300 13890051-13890358 intergenetic lncRNA (lincRNA) 308 24.35065 1