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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0503600.1 6 Osa06LNG0503600 13891306-13891579 intergenetic lncRNA (lincRNA) 274 27.0073 1
Osa06LNT0503500.1 6 Osa06LNG0503500 13891306-13891579 intergenetic lncRNA (lincRNA) 274 27.0073 1
Osa06LNT0325700.1 6 Osa06LNG0325700 1389894-1392540 long non-coding(lnc) isoforms of known genes 1442 44.93759 5
Osa06LNT0342500.1 6 Osa06LNG0342500 13899249-13901956 long non-coding(lnc) isoforms of known genes 2351 44.19396 5
Osa06LNT0342600.1 6 Osa06LNG0342600 13905135-13907448 long non-coding(lnc) isoforms of known genes 1171 52.09223 6
Osa06LNT0325600.2 6 Osa06LNG0325600 1405305-1406281 long non-coding(lnc) isoforms of known genes 900 58.77778 3
Osa06LNT0325600.1 6 Osa06LNG0325600 1405305-1406281 long non-coding(lnc) isoforms of known genes 710 50.70423 3
Osa06LNT0503800.1 6 Osa06LNG0503800 14092610-14092884 intergenetic lncRNA (lincRNA) 275 27.63636 1
Osa06LNT0503700.1 6 Osa06LNG0503700 14092610-14092884 intergenetic lncRNA (lincRNA) 275 27.63636 1
Osa06LNT0503900.1 6 Osa06LNG0503900 14137879-14138079 intergenetic lncRNA (lincRNA) 201 27.8607 1
Osa06LNT0504000.1 6 Osa06LNG0504000 14188980-14189179 intergenetic lncRNA (lincRNA) 200 30.5 1
Osa06LNT0504200.1 6 Osa06LNG0504200 14300239-14300526 intergenetic lncRNA (lincRNA) 288 27.08333 1
Osa06LNT0504100.1 6 Osa06LNG0504100 14300239-14300526 intergenetic lncRNA (lincRNA) 288 27.08333 1
Osa06LNT0342700.1 6 Osa06LNG0342700 14341194-14343610 intergenetic lncRNA (lincRNA) 555 57.47748 3
Osa06LNT0325800.1 6 Osa06LNG0325800 1438387-1445164 long non-coding(lnc) isoforms of known genes 2486 44.69027 15
Osa06LNT0342800.4 6 Osa06LNG0342800 14418400-14428766 long non-coding(lnc) isoforms of known genes 4330 37.96767 5
Osa06LNT0342800.1 6 Osa06LNG0342800 14418400-14428766 long non-coding(lnc) isoforms of known genes 1433 47.80181 6
Osa06LNT0342800.3 6 Osa06LNG0342800 14418400-14428766 long non-coding(lnc) isoforms of known genes 3488 39.70757 6
Osa06LNT0342800.2 6 Osa06LNG0342800 14418400-14428766 long non-coding(lnc) isoforms of known genes 3499 39.55416 6
Osa06LNT0342900.1 6 Osa06LNG0342900 14504152-14510090 long non-coding(lnc) isoforms of known genes 1929 43.33852 13
Osa06LNT0343100.2 6 Osa06LNG0343100 14602718-14605945 long non-coding(lnc) isoforms of known genes 2925 39.21368 4
Osa06LNT0343100.1 6 Osa06LNG0343100 14602718-14605945 long non-coding(lnc) isoforms of known genes 2929 39.87709 3
Osa06LNT0343000.1 6 Osa06LNG0343000 14790217-14790891 intergenetic lncRNA (lincRNA) 675 53.92593 1
Osa06LNT0343200.1 6 Osa06LNG0343200 14889330-14889619 intronic lncRNA 290 22.06897 1
Osa06LNT0343300.1 6 Osa06LNG0343300 15055943-15057682 intergenetic lncRNA (lincRNA) 347 47.83862 3