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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0043700.2 1 Osa01LNG0043700 34560584-34564323 sense lncRNA 853 49.12075 5
Osa01LNT0043700.1 1 Osa01LNG0043700 34560584-34564323 sense lncRNA 1972 42.64706 4
Osa01LNT0043800.1 1 Osa01LNG0043800 34565278-34568305 long non-coding(lnc) isoforms of known genes 1471 52.41332 3
Osa01LNT0004200.1 1 Osa01LNG0004200 3456801-3464081 long non-coding(lnc) isoforms of known genes 2980 40.67114 17
Osa01LNT0043900.1 1 Osa01LNG0043900 34583893-34587110 long non-coding(lnc) isoforms of known genes 2276 51.49385 7
Osa01LNT0043900.2 1 Osa01LNG0043900 34583893-34587110 long non-coding(lnc) isoforms of known genes 2339 50.9192 6
Osa01LNT0044000.1 1 Osa01LNG0044000 34629205-34635185 long non-coding(lnc) isoforms of known genes 2781 43.29378 12
Osa01LNT0044100.1 1 Osa01LNG0044100 34643311-34646270 long non-coding(lnc) isoforms of known genes 1349 53.81764 5
Osa01LNT0044200.1 1 Osa01LNG0044200 34647146-34650723 long non-coding(lnc) isoforms of known genes 1605 48.47352 10
Osa01LNT0044300.1 1 Osa01LNG0044300 34685668-34689816 sense lncRNA 2157 41.72462 2
Osa01LNT0044400.1 1 Osa01LNG0044400 34692912-34694382 long non-coding(lnc) isoforms of known genes 1371 59.81036 2
Osa01LNT0044500.1 1 Osa01LNG0044500 34737293-34738568 Antisense lncRNA 1033 42.11036 3
Osa01LNT0044600.1 1 Osa01LNG0044600 34738831-34746460 Antisense lncRNA 275 58.18182 3
Osa01LNT0461600.1 1 Osa01LNG0461600 34761140-34761343 intergenetic lncRNA (lincRNA) 204 27.94118 1
Osa01LNT0044700.1 1 Osa01LNG0044700 34949168-34959311 long non-coding(lnc) isoforms of known genes 3108 46.33205 20
Osa01LNT0004300.1 1 Osa01LNG0004300 3516766-3519077 long non-coding(lnc) isoforms of known genes 2114 51.13529 3
Osa01LNT0044800.1 1 Osa01LNG0044800 35518523-35523595 intergenetic lncRNA (lincRNA) 1131 45.00442 9
Osa01LNT0044900.1 1 Osa01LNG0044900 35601142-35603964 long non-coding(lnc) isoforms of known genes 1233 48.82401 5
Osa01LNT0044900.2 1 Osa01LNG0044900 35601142-35603964 long non-coding(lnc) isoforms of known genes 1061 51.46089 6
Osa01LNT0045000.1 1 Osa01LNG0045000 35700437-35707863 long non-coding(lnc) isoforms of known genes 1939 43.21815 12
Osa01LNT0045100.3 1 Osa01LNG0045100 35709533-35713312 long non-coding(lnc) isoforms of known genes 2250 50.62222 6
Osa01LNT0045100.1 1 Osa01LNG0045100 35709533-35713312 long non-coding(lnc) isoforms of known genes 1994 49.24774 6
Osa01LNT0045100.2 1 Osa01LNG0045100 35709533-35713312 long non-coding(lnc) isoforms of known genes 2223 50.60729 6
Osa01LNT0045100.4 1 Osa01LNG0045100 35709533-35713312 long non-coding(lnc) isoforms of known genes 2146 49.67381 6
Osa01LNT0045200.1 1 Osa01LNG0045200 35745526-35749594 long non-coding(lnc) isoforms of known genes 3853 38.46353 3