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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0344300.1 6 Osa06LNG0344300 16264401-16270836 long non-coding(lnc) isoforms of known genes 3016 42.50663 8
Osa06LNT0344400.1 6 Osa06LNG0344400 16307532-16309671 intergenetic lncRNA (lincRNA) 1929 42.45723 3
Osa06LNT0344400.2 6 Osa06LNG0344400 16307532-16309671 intergenetic lncRNA (lincRNA) 1373 46.10342 4
Osa06LNT0344500.1 6 Osa06LNG0344500 16363034-16366454 long non-coding(lnc) isoforms of known genes 1085 48.94009 9
Osa06LNT0326000.1 6 Osa06LNG0326000 1636572-1640852 long non-coding(lnc) isoforms of known genes 1569 52.51753 3
Osa06LNT0505000.1 6 Osa06LNG0505000 16436094-16436337 intergenetic lncRNA (lincRNA) 244 26.22951 1
Osa06LNT0505100.1 6 Osa06LNG0505100 16436404-16436678 intergenetic lncRNA (lincRNA) 275 25.81818 1
Osa06LNT0344800.1 6 Osa06LNG0344800 16436888-16437129 Antisense lncRNA 242 40.49587 1
Osa06LNT0344700.2 6 Osa06LNG0344700 16437200-16442840 long non-coding(lnc) isoforms of known genes 4950 48.72727 4
Osa06LNT0344700.1 6 Osa06LNG0344700 16437200-16442840 long non-coding(lnc) isoforms of known genes 4475 42.92737 4
Osa06LNT0344600.1 6 Osa06LNG0344600 16456058-16457602 intergenetic lncRNA (lincRNA) 1545 36.8932 1
Osa06LNT0344900.1 6 Osa06LNG0344900 16520651-16524559 long non-coding(lnc) isoforms of known genes 3548 44.81398 5
Osa06LNT0345000.1 6 Osa06LNG0345000 16700645-16703302 intergenetic lncRNA (lincRNA) 828 54.83092 3
Osa06LNT0345100.1 6 Osa06LNG0345100 16732927-16745608 long non-coding(lnc) isoforms of known genes 2106 47.05603 15
Osa06LNT0345200.1 6 Osa06LNG0345200 16825651-16836194 long non-coding(lnc) isoforms of known genes 3509 44.45711 16
Osa06LNT0505300.1 6 Osa06LNG0505300 16844393-16844666 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa06LNT0505200.1 6 Osa06LNG0505200 16844393-16844666 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa06LNT0345300.1 6 Osa06LNG0345300 16879177-16881638 long non-coding(lnc) isoforms of known genes 2026 46.00197 5
Osa06LNT0345500.2 6 Osa06LNG0345500 16963479-16966753 long non-coding(lnc) isoforms of known genes 2179 43.04727 5
Osa06LNT0345500.1 6 Osa06LNG0345500 16963479-16966753 long non-coding(lnc) isoforms of known genes 2369 42.42296 4
Osa06LNT0345400.1 6 Osa06LNG0345400 16991828-16995434 long non-coding(lnc) isoforms of known genes 3029 43.67778 4
Osa06LNT0345600.1 6 Osa06LNG0345600 16998502-17010226 long non-coding(lnc) isoforms of known genes 1253 41.97925 11
Osa06LNT0345600.2 6 Osa06LNG0345600 16998502-17010226 long non-coding(lnc) isoforms of known genes 1333 41.41035 10
Osa06LNT0505400.1 6 Osa06LNG0505400 17214638-17214911 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa06LNT0505500.1 6 Osa06LNG0505500 17214638-17214912 intergenetic lncRNA (lincRNA) 275 27.63636 1