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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0506900.1 6 Osa06LNG0506900 18331011-18331284 intergenetic lncRNA (lincRNA) 274 29.92701 1
Osa06LNT0507100.1 6 Osa06LNG0507100 18415172-18415445 intergenetic lncRNA (lincRNA) 274 30.29197 1
Osa06LNT0507200.1 6 Osa06LNG0507200 18415172-18415445 intergenetic lncRNA (lincRNA) 274 30.29197 1
Osa06LNT0346500.1 6 Osa06LNG0346500 18747278-18750238 long non-coding(lnc) isoforms of known genes 818 48.89976 5
Osa06LNT0346500.2 6 Osa06LNG0346500 18747278-18750238 long non-coding(lnc) isoforms of known genes 2170 40.59908 5
Osa06LNT0346600.1 6 Osa06LNG0346600 18913388-18915777 long non-coding(lnc) isoforms of known genes 1577 45.5929 2
Osa06LNT0346700.1 6 Osa06LNG0346700 18930828-18931467 intergenetic lncRNA (lincRNA) 402 47.26368 3
Osa06LNT0346800.1 6 Osa06LNG0346800 18945574-18954324 long non-coding(lnc) isoforms of known genes 1315 43.42205 5
Osa06LNT0507400.1 6 Osa06LNG0507400 19000154-19000427 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa06LNT0507300.1 6 Osa06LNG0507300 19000154-19000427 intergenetic lncRNA (lincRNA) 274 30.65693 1
Osa06LNT0326200.1 6 Osa06LNG0326200 1900853-1908968 long non-coding(lnc) isoforms of known genes 2564 42.90172 22
Osa06LNT0326200.2 6 Osa06LNG0326200 1900853-1908968 long non-coding(lnc) isoforms of known genes 2569 42.89607 22
Osa06LNT0323900.1 6 Osa06LNG0323900 190346-191493 long non-coding(lnc) isoforms of known genes 936 52.88462 3
Osa06LNT0346900.1 6 Osa06LNG0346900 19145612-19158546 long non-coding(lnc) isoforms of known genes 564 56.02837 4
Osa06LNT0507500.1 6 Osa06LNG0507500 19201325-19201541 intergenetic lncRNA (lincRNA) 217 40.553 1
Osa06LNT0507600.1 6 Osa06LNG0507600 19202092-19202336 intergenetic lncRNA (lincRNA) 245 28.97959 1
Osa06LNT0347000.2 6 Osa06LNG0347000 19231201-19234803 intergenetic lncRNA (lincRNA) 2642 48.4103 4
Osa06LNT0347000.1 6 Osa06LNG0347000 19231201-19234803 intergenetic lncRNA (lincRNA) 3240 48.3642 5
Osa06LNT0347100.1 6 Osa06LNG0347100 19338404-19344721 long non-coding(lnc) isoforms of known genes 1982 45.86276 8
Osa06LNT0347100.2 6 Osa06LNG0347100 19338404-19344721 long non-coding(lnc) isoforms of known genes 1875 46.45333 9
Osa06LNT0347200.2 6 Osa06LNG0347200 19418312-19421854 sense lncRNA 789 60.96324 2
Osa06LNT0347200.1 6 Osa06LNG0347200 19418312-19421854 sense lncRNA 591 67.00508 2
Osa06LNT0507800.1 6 Osa06LNG0507800 19430395-19430645 intergenetic lncRNA (lincRNA) 251 26.29482 1
Osa06LNT0507700.1 6 Osa06LNG0507700 19430395-19430645 intergenetic lncRNA (lincRNA) 251 26.29482 1
Osa06LNT0347300.1 6 Osa06LNG0347300 19495281-19496414 intergenetic lncRNA (lincRNA) 917 50.05453 3