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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0347400.1 6 Osa06LNG0347400 19516641-19524751 long non-coding(lnc) isoforms of known genes 3494 49.19863 10
Osa06LNT0347500.1 6 Osa06LNG0347500 19531822-19541910 long non-coding(lnc) isoforms of known genes 1131 52.51989 8
Osa06LNT0507900.1 6 Osa06LNG0507900 19560412-19560656 intronic lncRNA 245 36.73469 1
Osa06LNT0508000.1 6 Osa06LNG0508000 19655822-19656064 intergenetic lncRNA (lincRNA) 243 25.5144 1
Osa06LNT0508100.1 6 Osa06LNG0508100 19655822-19656064 intergenetic lncRNA (lincRNA) 243 25.5144 1
Osa06LNT0326400.1 6 Osa06LNG0326400 1973536-1980193 long non-coding(lnc) isoforms of known genes 2285 42.407 14
Osa06LNT0326300.1 6 Osa06LNG0326300 1983207-1983415 intergenetic lncRNA (lincRNA) 209 60.28708 1
Osa06LNT0508200.1 6 Osa06LNG0508200 20110063-20110337 intergenetic lncRNA (lincRNA) 275 22.90909 1
Osa06LNT0508300.1 6 Osa06LNG0508300 20110063-20110337 intergenetic lncRNA (lincRNA) 275 22.90909 1
Osa06LNT0347600.1 6 Osa06LNG0347600 20144388-20148062 long non-coding(lnc) isoforms of known genes 1433 50.38381 4
Osa06LNT0347700.1 6 Osa06LNG0347700 20215101-20217628 intergenetic lncRNA (lincRNA) 885 45.64972 2
Osa06LNT0347900.2 6 Osa06LNG0347900 20582021-20622700 long non-coding(lnc) isoforms of known genes 1166 62.6072 4
Osa06LNT0347900.1 6 Osa06LNG0347900 20582021-20622700 long non-coding(lnc) isoforms of known genes 1008 60.11905 4
Osa06LNT0347800.1 6 Osa06LNG0347800 20631617-20631818 intergenetic lncRNA (lincRNA) 202 34.65347 1
Osa06LNT0326500.1 6 Osa06LNG0326500 2071507-2072926 long non-coding(lnc) isoforms of known genes 384 48.69792 2
Osa06LNT0348100.1 6 Osa06LNG0348100 20821860-20825185 sense lncRNA 2732 43.48463 2
Osa06LNT0348100.2 6 Osa06LNG0348100 20821860-20825185 sense lncRNA 1846 47.83315 4
Osa06LNT0348000.1 6 Osa06LNG0348000 20873044-20873423 intergenetic lncRNA (lincRNA) 380 56.05263 1
Osa06LNT0326600.1 6 Osa06LNG0326600 2096121-2098396 intergenetic lncRNA (lincRNA) 2276 41.91564 1
Osa06LNT0348300.1 6 Osa06LNG0348300 20971498-20974245 long non-coding(lnc) isoforms of known genes 1080 43.51852 4
Osa06LNT0348200.1 6 Osa06LNG0348200 21000218-21000622 intergenetic lncRNA (lincRNA) 405 56.54321 1
Osa06LNT0348400.1 6 Osa06LNG0348400 21113264-21122133 long non-coding(lnc) isoforms of known genes 3951 45.78588 20
Osa06LNT0348500.1 6 Osa06LNG0348500 21167671-21171514 long non-coding(lnc) isoforms of known genes 1923 48.15393 7
Osa06LNT0348600.1 6 Osa06LNG0348600 21213920-21218158 long non-coding(lnc) isoforms of known genes 818 46.33252 4
Osa06LNT0508400.1 6 Osa06LNG0508400 21250664-21250921 intergenetic lncRNA (lincRNA) 258 42.63566 1