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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0509500.1 6 Osa06LNG0509500 22374046-22374321 intergenetic lncRNA (lincRNA) 276 26.81159 1
Osa06LNT0509600.1 6 Osa06LNG0509600 22380991-22381265 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa06LNT0509700.1 6 Osa06LNG0509700 22380991-22381265 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa06LNT0509800.1 6 Osa06LNG0509800 22492547-22492893 intergenetic lncRNA (lincRNA) 347 32.56484 1
Osa06LNT0327000.1 6 Osa06LNG0327000 2251031-2256626 long non-coding(lnc) isoforms of known genes 2812 45.55477 11
Osa06LNT0509900.1 6 Osa06LNG0509900 22567488-22567688 intergenetic lncRNA (lincRNA) 201 23.38308 1
Osa06LNT0349600.1 6 Osa06LNG0349600 22794577-22800135 long non-coding(lnc) isoforms of known genes 1976 53.03644 5
Osa06LNT0349700.1 6 Osa06LNG0349700 22856115-22856945 intergenetic lncRNA (lincRNA) 831 51.26354 1
Osa06LNT0327200.3 6 Osa06LNG0327200 2285947-2289982 sense lncRNA 3269 42.64301 4
Osa06LNT0327200.2 6 Osa06LNG0327200 2285947-2289982 sense lncRNA 1767 50.31126 5
Osa06LNT0327200.1 6 Osa06LNG0327200 2285947-2289982 sense lncRNA 2021 48.63929 5
Osa06LNT0327200.4 6 Osa06LNG0327200 2285947-2289982 sense lncRNA 1878 49.73376 6
Osa06LNT0349800.1 6 Osa06LNG0349800 22953242-22955664 Antisense lncRNA 290 52.75862 2
Osa06LNT0349900.1 6 Osa06LNG0349900 22956669-22962696 long non-coding(lnc) isoforms of known genes 977 56.9089 4
Osa06LNT0327100.1 6 Osa06LNG0327100 2300677-2301294 intergenetic lncRNA (lincRNA) 618 37.54045 1
Osa06LNT0350000.1 6 Osa06LNG0350000 23009014-23009898 intergenetic lncRNA (lincRNA) 798 49.74937 2
Osa06LNT0350100.1 6 Osa06LNG0350100 23013152-23021462 long non-coding(lnc) isoforms of known genes 1240 53.87097 3
Osa06LNT0350200.1 6 Osa06LNG0350200 23096847-23098167 long non-coding(lnc) isoforms of known genes 318 59.43396 2
Osa06LNT0327300.1 6 Osa06LNG0327300 2320914-2329651 long non-coding(lnc) isoforms of known genes 3356 44.42789 25
Osa06LNT0510000.1 6 Osa06LNG0510000 23403970-23404217 intergenetic lncRNA (lincRNA) 248 35.8871 1
Osa06LNT0350300.1 6 Osa06LNG0350300 23442875-23449447 long non-coding(lnc) isoforms of known genes 3657 50.53322 5
Osa06LNT0510100.1 6 Osa06LNG0510100 23455120-23455394 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa06LNT0510200.1 6 Osa06LNG0510200 23494164-23494401 intergenetic lncRNA (lincRNA) 238 29.41176 1
Osa06LNT0327400.3 6 Osa06LNG0327400 2358310-2365515 long non-coding(lnc) isoforms of known genes 2046 44.91691 15
Osa06LNT0327400.2 6 Osa06LNG0327400 2358310-2365515 long non-coding(lnc) isoforms of known genes 1596 44.61153 15