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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0352000.1 6 Osa06LNG0352000 24481995-24482805 sense lncRNA 712 51.82584 2
Osa06LNT0352000.2 6 Osa06LNG0352000 24481995-24482805 sense lncRNA 683 50.07321 2
Osa06LNT0352200.1 6 Osa06LNG0352200 24495729-24500436 Antisense lncRNA 1695 55.45723 12
Osa06LNT0352200.2 6 Osa06LNG0352200 24495729-24500436 Antisense lncRNA 1872 53.84615 13
Osa06LNT0352300.1 6 Osa06LNG0352300 24502484-24507123 long non-coding(lnc) isoforms of known genes 2502 56.51479 12
Osa06LNT0352400.1 6 Osa06LNG0352400 24506702-24506925 intergenetic lncRNA (lincRNA) 224 55.35714 1
Osa06LNT0352100.1 6 Osa06LNG0352100 24509578-24511683 intergenetic lncRNA (lincRNA) 1913 39.51908 2
Osa06LNT0352500.1 6 Osa06LNG0352500 24522241-24528522 long non-coding(lnc) isoforms of known genes 1597 59.23607 7
Osa06LNT0510400.1 6 Osa06LNG0510400 24612124-24612354 intergenetic lncRNA (lincRNA) 231 39.39394 1
Osa06LNT0352600.1 6 Osa06LNG0352600 24808764-24811947 sense lncRNA 1378 51.88679 3
Osa06LNT0352700.3 6 Osa06LNG0352700 24813851-24817759 long non-coding(lnc) isoforms of known genes 2227 46.51998 8
Osa06LNT0352700.2 6 Osa06LNG0352700 24813851-24817759 long non-coding(lnc) isoforms of known genes 1833 50.19094 8
Osa06LNT0352700.1 6 Osa06LNG0352700 24813851-24817759 long non-coding(lnc) isoforms of known genes 2313 46.34674 7
Osa06LNT0352800.2 6 Osa06LNG0352800 24946101-24953168 intergenetic lncRNA (lincRNA) 5416 42.9099 5
Osa06LNT0352800.1 6 Osa06LNG0352800 24946101-24953168 intergenetic lncRNA (lincRNA) 5399 42.97092 6
Osa06LNT0352900.1 6 Osa06LNG0352900 24974772-24978033 long non-coding(lnc) isoforms of known genes 2998 43.36224 2
Osa06LNT0353000.1 6 Osa06LNG0353000 24986845-24997890 long non-coding(lnc) isoforms of known genes 3545 43.35684 17
Osa06LNT0327800.1 6 Osa06LNG0327800 2498863-2502887 long non-coding(lnc) isoforms of known genes 1539 46.71865 9
Osa06LNT0353100.1 6 Osa06LNG0353100 25024583-25034830 long non-coding(lnc) isoforms of known genes 2876 46.03616 16
Osa06LNT0353100.2 6 Osa06LNG0353100 25024583-25034830 long non-coding(lnc) isoforms of known genes 2984 45.87802 16
Osa06LNT0353200.1 6 Osa06LNG0353200 25054771-25058817 long non-coding(lnc) isoforms of known genes 1748 53.20366 8
Osa06LNT0327900.1 6 Osa06LNG0327900 2505623-2509012 long non-coding(lnc) isoforms of known genes 1039 50.14437 6
Osa06LNT0353300.1 6 Osa06LNG0353300 25200382-25207810 long non-coding(lnc) isoforms of known genes 3208 43.26683 19
Osa06LNT0328000.1 6 Osa06LNG0328000 2553095-2554545 Antisense lncRNA 359 48.46797 3
Osa06LNT0353400.1 6 Osa06LNG0353400 25669995-25671891 sense lncRNA 760 42.89474 2