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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0353500.1 6 Osa06LNG0353500 25707202-25714678 long non-coding(lnc) isoforms of known genes 4060 46.69951 6
Osa06LNT0353600.1 6 Osa06LNG0353600 25718165-25722139 long non-coding(lnc) isoforms of known genes 1411 47.1297 8
Osa06LNT0353700.1 6 Osa06LNG0353700 25727513-25733219 long non-coding(lnc) isoforms of known genes 2870 47.31707 16
Osa06LNT0353800.1 6 Osa06LNG0353800 25858898-25863343 intergenetic lncRNA (lincRNA) 1094 51.64534 4
Osa06LNT0353900.1 6 Osa06LNG0353900 25928042-25929248 long non-coding(lnc) isoforms of known genes 1077 41.22563 2
Osa06LNT0354000.2 6 Osa06LNG0354000 25963878-25974634 long non-coding(lnc) isoforms of known genes 4197 48.24875 9
Osa06LNT0354000.1 6 Osa06LNG0354000 25963878-25974634 long non-coding(lnc) isoforms of known genes 5861 47.92697 15
Osa06LNT0510500.1 6 Osa06LNG0510500 26031190-26031427 intergenetic lncRNA (lincRNA) 238 42.43697 1
Osa06LNT0510600.1 6 Osa06LNG0510600 26031258-26031457 intergenetic lncRNA (lincRNA) 200 40.0 1
Osa06LNT0354100.1 6 Osa06LNG0354100 26190057-26197385 long non-coding(lnc) isoforms of known genes 3248 41.53325 9
Osa06LNT0354200.2 6 Osa06LNG0354200 26220050-26220355 intergenetic lncRNA (lincRNA) 305 63.93443 1
Osa06LNT0354200.1 6 Osa06LNG0354200 26220050-26220355 intergenetic lncRNA (lincRNA) 306 63.72549 1
Osa06LNT0354300.1 6 Osa06LNG0354300 26242050-26250398 long non-coding(lnc) isoforms of known genes 3574 46.33464 13
Osa06LNT0354400.1 6 Osa06LNG0354400 26254217-26259239 long non-coding(lnc) isoforms of known genes 2119 46.95611 10
Osa06LNT0328200.3 6 Osa06LNG0328200 2635915-2641269 long non-coding(lnc) isoforms of known genes 1420 49.29577 10
Osa06LNT0328200.1 6 Osa06LNG0328200 2635915-2641269 long non-coding(lnc) isoforms of known genes 2087 43.93867 8
Osa06LNT0328200.2 6 Osa06LNG0328200 2635915-2641269 long non-coding(lnc) isoforms of known genes 2014 44.43893 9
Osa06LNT0328200.4 6 Osa06LNG0328200 2635915-2641269 long non-coding(lnc) isoforms of known genes 2354 44.18012 7
Osa06LNT0354500.1 6 Osa06LNG0354500 26361294-26367555 long non-coding(lnc) isoforms of known genes 2766 42.08243 9
Osa06LNT0354600.1 6 Osa06LNG0354600 26421531-26427844 sense lncRNA 1464 59.90437 5
Osa06LNT0328100.1 6 Osa06LNG0328100 2642359-2645172 long non-coding(lnc) isoforms of known genes 863 48.08806 4
Osa06LNT0354700.1 6 Osa06LNG0354700 26471877-26478872 sense lncRNA 6917 40.24866 2
Osa06LNT0354800.3 6 Osa06LNG0354800 26554465-26561225 intergenetic lncRNA (lincRNA) 1964 45.16293 6
Osa06LNT0354800.4 6 Osa06LNG0354800 26554465-26561225 intergenetic lncRNA (lincRNA) 2009 45.69438 6
Osa06LNT0354800.2 6 Osa06LNG0354800 26554465-26561225 intergenetic lncRNA (lincRNA) 2088 45.25862 5