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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0356100.1 6 Osa06LNG0356100 27428890-27431107 long non-coding(lnc) isoforms of known genes 1903 50.86705 2
Osa06LNT0356600.1 6 Osa06LNG0356600 27492866-27499531 long non-coding(lnc) isoforms of known genes 2365 56.06765 12
Osa06LNT0356700.1 6 Osa06LNG0356700 27545628-27546423 intergenetic lncRNA (lincRNA) 796 55.65327 1
Osa06LNT0511000.1 6 Osa06LNG0511000 27574529-27574736 intergenetic lncRNA (lincRNA) 208 37.5 1
Osa06LNT0356800.1 6 Osa06LNG0356800 27654732-27654962 Antisense lncRNA 231 51.08225 1
Osa06LNT0324000.1 6 Osa06LNG0324000 276729-282165 long non-coding(lnc) isoforms of known genes 2707 46.69376 14
Osa06LNT0324000.3 6 Osa06LNG0324000 276729-282165 long non-coding(lnc) isoforms of known genes 2711 46.66175 14
Osa06LNT0324000.2 6 Osa06LNG0324000 276729-282165 long non-coding(lnc) isoforms of known genes 2548 46.93878 15
Osa06LNT0511100.1 6 Osa06LNG0511100 27674746-27674951 intergenetic lncRNA (lincRNA) 206 45.14563 1
Osa06LNT0356900.1 6 Osa06LNG0356900 27708558-27718445 long non-coding(lnc) isoforms of known genes 4943 43.37447 17
Osa06LNT0356900.2 6 Osa06LNG0356900 27708558-27718445 long non-coding(lnc) isoforms of known genes 4040 43.5396 15
Osa06LNT0357000.1 6 Osa06LNG0357000 27734973-27740719 long non-coding(lnc) isoforms of known genes 1513 50.82617 9
Osa06LNT0328400.3 6 Osa06LNG0328400 2774537-2779814 long non-coding(lnc) isoforms of known genes 1143 46.89414 8
Osa06LNT0328400.1 6 Osa06LNG0328400 2774537-2779814 long non-coding(lnc) isoforms of known genes 1650 43.45455 6
Osa06LNT0328400.2 6 Osa06LNG0328400 2774537-2779814 long non-coding(lnc) isoforms of known genes 1042 47.98464 7
Osa06LNT0357100.1 6 Osa06LNG0357100 27814803-27815748 intergenetic lncRNA (lincRNA) 801 39.70037 2
Osa06LNT0357300.1 6 Osa06LNG0357300 27923555-27926275 sense lncRNA 938 49.25373 3
Osa06LNT0357200.1 6 Osa06LNG0357200 27929735-27932433 long non-coding(lnc) isoforms of known genes 867 47.2895 3
Osa06LNT0357400.1 6 Osa06LNG0357400 27953257-27956709 sense lncRNA 1483 49.02225 2
Osa06LNT0357500.3 6 Osa06LNG0357500 27960874-27971394 long non-coding(lnc) isoforms of known genes 681 43.46549 6
Osa06LNT0357500.1 6 Osa06LNG0357500 27960874-27971394 long non-coding(lnc) isoforms of known genes 234 42.73504 3
Osa06LNT0357500.2 6 Osa06LNG0357500 27960874-27971394 long non-coding(lnc) isoforms of known genes 641 43.83775 5
Osa06LNT0511200.1 6 Osa06LNG0511200 27997452-27997665 intergenetic lncRNA (lincRNA) 214 39.25234 1
Osa06LNT0357600.1 6 Osa06LNG0357600 28059549-28065151 long non-coding(lnc) isoforms of known genes 2112 45.73864 14
Osa06LNT0357700.1 6 Osa06LNG0357700 28173143-28174156 intergenetic lncRNA (lincRNA) 1014 45.26627 1