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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0324100.1 6 Osa06LNG0324100 387238-394136 long non-coding(lnc) isoforms of known genes 5025 48.21891 13
Osa06LNT0324100.2 6 Osa06LNG0324100 387238-394136 long non-coding(lnc) isoforms of known genes 4903 48.31736 14
Osa06LNT0330400.1 6 Osa06LNG0330400 3924753-3927950 long non-coding(lnc) isoforms of known genes 2071 51.90729 9
Osa06LNT0330500.1 6 Osa06LNG0330500 3934027-3937229 long non-coding(lnc) isoforms of known genes 2747 47.25155 2
Osa06LNT0330600.2 6 Osa06LNG0330600 3956172-3961586 long non-coding(lnc) isoforms of known genes 3179 43.15823 8
Osa06LNT0330600.1 6 Osa06LNG0330600 3956172-3961586 long non-coding(lnc) isoforms of known genes 1798 46.66296 7
Osa06LNT0324200.1 6 Osa06LNG0324200 398679-403482 long non-coding(lnc) isoforms of known genes 1482 46.2888 9
Osa06LNT0330700.1 6 Osa06LNG0330700 3995572-3996571 Antisense lncRNA 670 59.40299 4
Osa06LNT0330800.1 6 Osa06LNG0330800 4062334-4063409 long non-coding(lnc) isoforms of known genes 986 71.29817 2
Osa06LNT0330900.1 6 Osa06LNG0330900 4167296-4183929 long non-coding(lnc) isoforms of known genes 4710 45.138 31
Osa06LNT0331000.1 6 Osa06LNG0331000 4345819-4353377 long non-coding(lnc) isoforms of known genes 2601 44.55978 11
Osa06LNT0331100.1 6 Osa06LNG0331100 4424387-4425761 sense lncRNA 1201 52.37302 2
Osa06LNT0331200.1 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2355 42.03822 6
Osa06LNT0331200.2 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2352 42.0068 6
Osa06LNT0331200.3 6 Osa06LNG0331200 4463906-4467588 intergenetic lncRNA (lincRNA) 2258 41.00974 7
Osa06LNT0331300.1 6 Osa06LNG0331300 4468376-4470901 sense lncRNA 2036 40.22593 3
Osa06LNT0331400.1 6 Osa06LNG0331400 4472394-4476671 long non-coding(lnc) isoforms of known genes 2546 44.93323 5
Osa06LNT0331600.1 6 Osa06LNG0331600 4571098-4574904 long non-coding(lnc) isoforms of known genes 2069 46.30256 6
Osa06LNT0331600.2 6 Osa06LNG0331600 4571098-4574904 long non-coding(lnc) isoforms of known genes 2034 45.91937 6
Osa06LNT0331500.1 6 Osa06LNG0331500 4587586-4590880 long non-coding(lnc) isoforms of known genes 1988 44.01408 5
Osa06LNT0331700.1 6 Osa06LNG0331700 4594428-4595688 long non-coding(lnc) isoforms of known genes 1031 40.93113 2
Osa06LNT0331900.1 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2559 48.88628 16
Osa06LNT0331900.2 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2603 48.75144 16
Osa06LNT0331900.3 6 Osa06LNG0331900 4796714-4802472 long non-coding(lnc) isoforms of known genes 2685 48.19367 16
Osa06LNT0332000.1 6 Osa06LNG0332000 4799091-4799748 long non-coding(lnc) isoforms of known genes 573 46.9459 2