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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0335400.1 6 Osa06LNG0335400 6823036-6832896 long non-coding(lnc) isoforms of known genes 3880 47.80928 13
Osa06LNT0335500.1 6 Osa06LNG0335500 6906933-6908001 long non-coding(lnc) isoforms of known genes 947 47.51848 2
Osa06LNT0335600.1 6 Osa06LNG0335600 7005888-7008330 long non-coding(lnc) isoforms of known genes 1544 62.24093 3
Osa06LNT0335800.1 6 Osa06LNG0335800 7078859-7082232 long non-coding(lnc) isoforms of known genes 1330 47.66917 8
Osa06LNT0335700.1 6 Osa06LNG0335700 7086668-7088509 sense lncRNA 296 49.66216 2
Osa06LNT0335900.1 6 Osa06LNG0335900 7120876-7122798 sense lncRNA 919 43.30794 7
Osa06LNT0336000.1 6 Osa06LNG0336000 7128403-7133562 long non-coding(lnc) isoforms of known genes 2859 43.19692 12
Osa06LNT0336100.1 6 Osa06LNG0336100 7148668-7155330 long non-coding(lnc) isoforms of known genes 2171 46.70659 17
Osa06LNT0336200.1 6 Osa06LNG0336200 7160043-7164695 long non-coding(lnc) isoforms of known genes 2297 50.76186 12
Osa06LNT0336300.1 6 Osa06LNG0336300 7169239-7173005 long non-coding(lnc) isoforms of known genes 2287 49.71578 5
Osa06LNT0336400.1 6 Osa06LNG0336400 7287849-7290591 long non-coding(lnc) isoforms of known genes 1084 52.95203 2
Osa06LNT0498200.1 6 Osa06LNG0498200 7387215-7387488 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa06LNT0498300.1 6 Osa06LNG0498300 7387215-7387488 intergenetic lncRNA (lincRNA) 274 26.27737 1
Osa06LNT0336500.1 6 Osa06LNG0336500 7406049-7408609 long non-coding(lnc) isoforms of known genes 1952 37.80738 3
Osa06LNT0498400.1 6 Osa06LNG0498400 7451886-7452155 intergenetic lncRNA (lincRNA) 270 24.07407 1
Osa06LNT0498500.1 6 Osa06LNG0498500 7451886-7452155 intergenetic lncRNA (lincRNA) 270 24.07407 1
Osa06LNT0498600.1 6 Osa06LNG0498600 7452524-7452791 intergenetic lncRNA (lincRNA) 268 38.43284 1
Osa06LNT0336600.1 6 Osa06LNG0336600 7497904-7500603 long non-coding(lnc) isoforms of known genes 1373 53.75091 9
Osa06LNT0336700.1 6 Osa06LNG0336700 7563895-7570729 sense lncRNA 4114 45.47885 5
Osa06LNT0336800.1 6 Osa06LNG0336800 7765020-7769421 sense lncRNA 2655 44.97175 6
Osa06LNT0324400.1 6 Osa06LNG0324400 783550-783946 intergenetic lncRNA (lincRNA) 397 61.71285 1
Osa06LNT0336900.1 6 Osa06LNG0336900 7841699-7844795 long non-coding(lnc) isoforms of known genes 1954 45.49642 2
Osa06LNT0337000.1 6 Osa06LNG0337000 7849659-7851484 long non-coding(lnc) isoforms of known genes 1444 41.27424 5
Osa06LNT0498800.1 6 Osa06LNG0498800 8018484-8018769 intergenetic lncRNA (lincRNA) 286 24.47552 1
Osa06LNT0498700.1 6 Osa06LNG0498700 8018484-8018769 intergenetic lncRNA (lincRNA) 286 24.47552 1