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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa06LNT0338000.1 6 Osa06LNG0338000 8868053-8869886 long non-coding(lnc) isoforms of known genes 1753 54.07872 2
Osa06LNT0325000.1 6 Osa06LNG0325000 893171-896275 intergenetic lncRNA (lincRNA) 1533 58.64318 4
Osa06LNT0338100.1 6 Osa06LNG0338100 8939303-8940456 intergenetic lncRNA (lincRNA) 331 55.89124 2
Osa06LNT0338200.1 6 Osa06LNG0338200 8960029-8964614 long non-coding(lnc) isoforms of known genes 1981 49.72236 6
Osa06LNT0338200.2 6 Osa06LNG0338200 8960029-8964614 long non-coding(lnc) isoforms of known genes 1958 41.21553 4
Osa06LNT0499700.1 6 Osa06LNG0499700 9130318-9130590 intergenetic lncRNA (lincRNA) 273 27.83883 1
Osa06LNT0338300.1 6 Osa06LNG0338300 9131060-9135024 long non-coding(lnc) isoforms of known genes 3716 42.19591 4
Osa06LNT0338400.1 6 Osa06LNG0338400 9266839-9278517 long non-coding(lnc) isoforms of known genes 3124 42.54161 31
Osa06LNT0338500.1 6 Osa06LNG0338500 9278574-9281214 intergenetic lncRNA (lincRNA) 487 60.57495 2
Osa06LNT0496100.1 6 Osa06LNG0496100 939271-939495 intergenetic lncRNA (lincRNA) 225 39.55556 1
Osa06LNT0499900.1 6 Osa06LNG0499900 9547257-9547531 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa06LNT0499800.1 6 Osa06LNG0499800 9547257-9547531 intergenetic lncRNA (lincRNA) 275 24.0 1
Osa06LNT0500000.1 6 Osa06LNG0500000 9547598-9547842 intergenetic lncRNA (lincRNA) 245 24.08163 1
Osa06LNT0500100.1 6 Osa06LNG0500100 9615626-9615851 intergenetic lncRNA (lincRNA) 226 49.55752 1
Osa06LNT0500200.1 6 Osa06LNG0500200 9632408-9632682 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa06LNT0500300.1 6 Osa06LNG0500300 9632408-9632682 intergenetic lncRNA (lincRNA) 275 25.45455 1
Osa06LNT0338600.1 6 Osa06LNG0338600 9634121-9636421 long non-coding(lnc) isoforms of known genes 1041 48.1268 3
Osa06LNT0338700.1 6 Osa06LNG0338700 9805281-9809057 sense lncRNA 965 62.90155 2
Osa06LNT0338900.1 6 Osa06LNG0338900 9840913-9857072 long non-coding(lnc) isoforms of known genes 3993 43.35086 21
Osa06LNT0338900.2 6 Osa06LNG0338900 9840913-9857072 long non-coding(lnc) isoforms of known genes 3876 43.47265 22
Osa06LNT0338800.1 6 Osa06LNG0338800 9917560-9918729 intronic lncRNA 1170 41.02564 1
Osa07LNT0374000.1 7 Osa07LNG0374000 10057776-10060822 long non-coding(lnc) isoforms of known genes 1338 44.39462 3
Osa07LNT0374100.1 7 Osa07LNG0374100 10127751-10138242 long non-coding(lnc) isoforms of known genes 3104 43.29897 13
Osa07LNT0374200.1 7 Osa07LNG0374200 10180456-10200241 long non-coding(lnc) isoforms of known genes 4527 44.28982 6
Osa07LNT0374300.1 7 Osa07LNG0374300 10494806-10495235 intergenetic lncRNA (lincRNA) 430 66.74419 1