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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0375300.1 7 Osa07LNG0375300 11592363-11596835 long non-coding(lnc) isoforms of known genes 1485 49.22559 8
Osa07LNT0375400.1 7 Osa07LNG0375400 11632185-11636632 long non-coding(lnc) isoforms of known genes 1674 54.48029 13
Osa07LNT0375600.1 7 Osa07LNG0375600 11644319-11646175 sense lncRNA 1045 52.82297 3
Osa07LNT0375500.1 7 Osa07LNG0375500 11721586-11722157 intergenetic lncRNA (lincRNA) 572 67.48252 1
Osa07LNT0375700.1 7 Osa07LNG0375700 11887215-11894395 long non-coding(lnc) isoforms of known genes 2803 45.59401 12
Osa07LNT0375700.4 7 Osa07LNG0375700 11887215-11894395 long non-coding(lnc) isoforms of known genes 2096 48.33015 13
Osa07LNT0375700.3 7 Osa07LNG0375700 11887215-11894395 long non-coding(lnc) isoforms of known genes 3129 42.47363 12
Osa07LNT0375700.2 7 Osa07LNG0375700 11887215-11894395 long non-coding(lnc) isoforms of known genes 3662 41.94429 12
Osa07LNT0364000.1 7 Osa07LNG0364000 1199188-1201426 long non-coding(lnc) isoforms of known genes 1277 51.91856 2
Osa07LNT0364100.1 7 Osa07LNG0364100 1202315-1207049 sense lncRNA 2433 53.84299 12
Osa07LNT0364200.1 7 Osa07LNG0364200 1215390-1215649 intronic lncRNA 260 32.30769 1
Osa07LNT0375800.1 7 Osa07LNG0375800 12545755-12546892 long non-coding(lnc) isoforms of known genes 840 40.35714 3
Osa07LNT0375900.2 7 Osa07LNG0375900 12652992-12656414 long non-coding(lnc) isoforms of known genes 1008 47.81746 5
Osa07LNT0375900.1 7 Osa07LNG0375900 12652992-12656414 long non-coding(lnc) isoforms of known genes 1011 47.77448 5
Osa07LNT0375900.3 7 Osa07LNG0375900 12652992-12656414 long non-coding(lnc) isoforms of known genes 1484 43.0593 5
Osa07LNT0526900.1 7 Osa07LNG0526900 12738752-12739007 intergenetic lncRNA (lincRNA) 256 26.17188 1
Osa07LNT0376000.1 7 Osa07LNG0376000 12783994-12790289 long non-coding(lnc) isoforms of known genes 1840 43.53261 16
Osa07LNT0376100.1 7 Osa07LNG0376100 12795131-12803556 long non-coding(lnc) isoforms of known genes 2238 44.86148 11
Osa07LNT0376200.1 7 Osa07LNG0376200 12916973-12924202 long non-coding(lnc) isoforms of known genes 2465 45.07099 13
Osa07LNT0376300.1 7 Osa07LNG0376300 13064436-13068270 long non-coding(lnc) isoforms of known genes 1489 47.07858 5
Osa07LNT0376400.1 7 Osa07LNG0376400 13074446-13078520 long non-coding(lnc) isoforms of known genes 1348 50.07418 10
Osa07LNT0376500.1 7 Osa07LNG0376500 13149642-13153367 sense lncRNA 2030 44.48276 9
Osa07LNT0376600.1 7 Osa07LNG0376600 13275950-13283719 long non-coding(lnc) isoforms of known genes 4785 47.628 7
Osa07LNT0376700.2 7 Osa07LNG0376700 13309324-13311967 intergenetic lncRNA (lincRNA) 2418 37.13813 3
Osa07LNT0376700.1 7 Osa07LNG0376700 13309324-13311967 intergenetic lncRNA (lincRNA) 985 42.53807 4