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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0527000.1 7 Osa07LNG0527000 13364859-13365081 intergenetic lncRNA (lincRNA) 223 24.21525 1
Osa07LNT0376800.1 7 Osa07LNG0376800 13436764-13440194 long non-coding(lnc) isoforms of known genes 2338 41.23182 2
Osa07LNT0376800.2 7 Osa07LNG0376800 13436764-13440194 sense lncRNA 3094 40.69166 2
Osa07LNT0527100.1 7 Osa07LNG0527100 13502651-13503006 intergenetic lncRNA (lincRNA) 356 54.21348 1
Osa07LNT0527200.1 7 Osa07LNG0527200 13502779-13503043 intergenetic lncRNA (lincRNA) 265 53.58491 1
Osa07LNT0376900.1 7 Osa07LNG0376900 13523436-13530672 long non-coding(lnc) isoforms of known genes 2954 45.26066 13
Osa07LNT0376900.2 7 Osa07LNG0376900 13523436-13530672 long non-coding(lnc) isoforms of known genes 2448 48.08007 12
Osa07LNT0376900.4 7 Osa07LNG0376900 13523436-13530672 long non-coding(lnc) isoforms of known genes 2560 47.57812 12
Osa07LNT0376900.3 7 Osa07LNG0376900 13523436-13530672 long non-coding(lnc) isoforms of known genes 2358 48.72774 14
Osa07LNT0377000.1 7 Osa07LNG0377000 13776950-13779920 sense lncRNA 1450 46.55172 2
Osa07LNT0377100.2 7 Osa07LNG0377100 14485257-14489280 sense lncRNA 3391 39.95871 2
Osa07LNT0377100.1 7 Osa07LNG0377100 14485257-14489280 sense lncRNA 2944 40.35326 2
Osa07LNT0377200.2 7 Osa07LNG0377200 14506007-14512581 long non-coding(lnc) isoforms of known genes 3583 42.11555 7
Osa07LNT0377200.1 7 Osa07LNG0377200 14506007-14512581 long non-coding(lnc) isoforms of known genes 3309 44.09187 7
Osa07LNT0377300.1 7 Osa07LNG0377300 14610582-14611081 intronic lncRNA 500 37.2 1
Osa07LNT0377400.1 7 Osa07LNG0377400 14715004-14716454 long non-coding(lnc) isoforms of known genes 1366 42.89898 2
Osa07LNT0377500.1 7 Osa07LNG0377500 14774634-14779028 long non-coding(lnc) isoforms of known genes 1166 43.31046 5
Osa07LNT0521700.1 7 Osa07LNG0521700 1480929-1481203 intergenetic lncRNA (lincRNA) 275 26.18182 1
Osa07LNT0527400.1 7 Osa07LNG0527400 14819176-14819465 intergenetic lncRNA (lincRNA) 290 26.2069 1
Osa07LNT0527300.1 7 Osa07LNG0527300 14819176-14819465 intergenetic lncRNA (lincRNA) 290 26.2069 1
Osa07LNT0377600.1 7 Osa07LNG0377600 14899931-14900470 intergenetic lncRNA (lincRNA) 540 53.33333 1
Osa07LNT0527500.1 7 Osa07LNG0527500 14984696-14984940 intergenetic lncRNA (lincRNA) 245 24.4898 1
Osa07LNT0377700.1 7 Osa07LNG0377700 14993583-14996370 intergenetic lncRNA (lincRNA) 988 44.93927 5
Osa07LNT0364300.1 7 Osa07LNG0364300 1503402-1505523 intergenetic lncRNA (lincRNA) 541 60.62847 3
Osa07LNT0521800.1 7 Osa07LNG0521800 1506858-1507132 intergenetic lncRNA (lincRNA) 275 25.81818 1