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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0528200.1 7 Osa07LNG0528200 16069069-16069290 intergenetic lncRNA (lincRNA) 222 58.10811 1
Osa07LNT0364400.1 7 Osa07LNG0364400 1610781-1612163 intronic lncRNA 1383 44.68547 1
Osa07LNT0378900.1 7 Osa07LNG0378900 16196212-16205951 long non-coding(lnc) isoforms of known genes 3722 43.55185 9
Osa07LNT0528400.1 7 Osa07LNG0528400 16417572-16417816 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa07LNT0528300.1 7 Osa07LNG0528300 16417572-16417816 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa07LNT0379000.2 7 Osa07LNG0379000 16426969-16429841 long non-coding(lnc) isoforms of known genes 1379 47.78825 6
Osa07LNT0379000.1 7 Osa07LNG0379000 16426969-16429841 long non-coding(lnc) isoforms of known genes 2003 41.38792 5
Osa07LNT0379100.1 7 Osa07LNG0379100 16522454-16524005 long non-coding(lnc) isoforms of known genes 638 52.66458 4
Osa07LNT0379200.1 7 Osa07LNG0379200 16705383-16708472 intergenetic lncRNA (lincRNA) 901 47.72475 2
Osa07LNT0379300.1 7 Osa07LNG0379300 16815439-16816828 sense lncRNA 876 52.28311 2
Osa07LNT0379400.1 7 Osa07LNG0379400 16941892-16946832 sense lncRNA 4488 45.56595 2
Osa07LNT0528600.1 7 Osa07LNG0528600 17015145-17015418 intergenetic lncRNA (lincRNA) 274 29.56204 1
Osa07LNT0528500.1 7 Osa07LNG0528500 17015145-17015418 intergenetic lncRNA (lincRNA) 274 29.56204 1
Osa07LNT0528700.1 7 Osa07LNG0528700 17031041-17031277 intergenetic lncRNA (lincRNA) 237 41.35021 1
Osa07LNT0528800.1 7 Osa07LNG0528800 17031793-17032037 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa07LNT0528900.1 7 Osa07LNG0528900 17158573-17158812 intergenetic lncRNA (lincRNA) 240 31.25 1
Osa07LNT0379500.1 7 Osa07LNG0379500 17198555-17209499 long non-coding(lnc) isoforms of known genes 2052 49.02534 15
Osa07LNT0379700.2 7 Osa07LNG0379700 17230466-17245273 long non-coding(lnc) isoforms of known genes 2862 40.7058 14
Osa07LNT0379700.1 7 Osa07LNG0379700 17230466-17245273 long non-coding(lnc) isoforms of known genes 4054 45.2886 23
Osa07LNT0379600.1 7 Osa07LNG0379600 17254973-17260556 long non-coding(lnc) isoforms of known genes 1204 44.93355 8
Osa07LNT0379800.1 7 Osa07LNG0379800 17421280-17425421 long non-coding(lnc) isoforms of known genes 992 48.89113 6
Osa07LNT0379900.2 7 Osa07LNG0379900 17426566-17429414 long non-coding(lnc) isoforms of known genes 982 45.41752 6
Osa07LNT0379900.1 7 Osa07LNG0379900 17426566-17429414 long non-coding(lnc) isoforms of known genes 987 45.39007 6
Osa07LNT0380000.1 7 Osa07LNG0380000 17717318-17717869 intergenetic lncRNA (lincRNA) 552 59.60145 1
Osa07LNT0529000.1 7 Osa07LNG0529000 17757537-17757753 intergenetic lncRNA (lincRNA) 217 40.553 1