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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0387600.3 7 Osa07LNG0387600 24118352-24125221 long non-coding(lnc) isoforms of known genes 2944 42.01766 7
Osa07LNT0387600.1 7 Osa07LNG0387600 24118352-24125221 long non-coding(lnc) isoforms of known genes 2624 43.44512 8
Osa07LNT0387600.2 7 Osa07LNG0387600 24118352-24125221 long non-coding(lnc) isoforms of known genes 2426 43.6521 8
Osa07LNT0387700.1 7 Osa07LNG0387700 24240526-24243837 sense lncRNA 2001 52.07396 2
Osa07LNT0387900.1 7 Osa07LNG0387900 24312094-24315383 long non-coding(lnc) isoforms of known genes 2618 44.99618 3
Osa07LNT0387800.1 7 Osa07LNG0387800 24341172-24341415 intergenetic lncRNA (lincRNA) 244 73.36066 1
Osa07LNT0388000.1 7 Osa07LNG0388000 24429316-24432826 long non-coding(lnc) isoforms of known genes 1829 48.49645 7
Osa07LNT0388100.1 7 Osa07LNG0388100 24493726-24497549 long non-coding(lnc) isoforms of known genes 1534 51.1734 14
Osa07LNT0388200.2 7 Osa07LNG0388200 24580091-24584400 long non-coding(lnc) isoforms of known genes 1863 51.47611 10
Osa07LNT0388200.1 7 Osa07LNG0388200 24580091-24584400 long non-coding(lnc) isoforms of known genes 1679 52.70995 11
Osa07LNT0365600.1 7 Osa07LNG0365600 2464267-2465744 Antisense lncRNA 1036 42.18147 3
Osa07LNT0388300.1 7 Osa07LNG0388300 24796286-24800235 intergenetic lncRNA (lincRNA) 3624 43.79139 2
Osa07LNT0388400.1 7 Osa07LNG0388400 24904705-24905304 intronic lncRNA 600 63.16667 1
Osa07LNT0388500.1 7 Osa07LNG0388500 24996763-25001214 long non-coding(lnc) isoforms of known genes 2686 43.1869 6
Osa07LNT0531900.1 7 Osa07LNG0531900 25146924-25147136 intergenetic lncRNA (lincRNA) 213 48.35681 1
Osa07LNT0388600.1 7 Osa07LNG0388600 25213823-25214483 intergenetic lncRNA (lincRNA) 570 48.07018 2
Osa07LNT0388700.1 7 Osa07LNG0388700 25569076-25571773 long non-coding(lnc) isoforms of known genes 876 41.89498 4
Osa07LNT0388800.1 7 Osa07LNG0388800 25611983-25616341 long non-coding(lnc) isoforms of known genes 1907 50.5506 8
Osa07LNT0388800.2 7 Osa07LNG0388800 25611983-25616341 long non-coding(lnc) isoforms of known genes 1967 50.02542 7
Osa07LNT0388900.1 7 Osa07LNG0388900 25645996-25649158 long non-coding(lnc) isoforms of known genes 1675 43.70149 6
Osa07LNT0389200.1 7 Osa07LNG0389200 25679840-25688015 long non-coding(lnc) isoforms of known genes 6376 41.68758 5
Osa07LNT0389200.2 7 Osa07LNG0389200 25679840-25688015 long non-coding(lnc) isoforms of known genes 6129 41.06706 4
Osa07LNT0365700.1 7 Osa07LNG0365700 2568155-2570723 long non-coding(lnc) isoforms of known genes 545 55.77982 4
Osa07LNT0389000.1 7 Osa07LNG0389000 25691710-25694713 intergenetic lncRNA (lincRNA) 994 46.37827 5
Osa07LNT0389100.1 7 Osa07LNG0389100 25696895-25704080 long non-coding(lnc) isoforms of known genes 2114 53.12204 8