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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0390800.1 7 Osa07LNG0390800 26886336-26908536 long non-coding(lnc) isoforms of known genes 12113 44.4316 36
Osa07LNT0390900.1 7 Osa07LNG0390900 26918373-26923890 long non-coding(lnc) isoforms of known genes 1619 58.8635 3
Osa07LNT0391000.3 7 Osa07LNG0391000 26962931-26967260 long non-coding(lnc) isoforms of known genes 1940 61.13402 4
Osa07LNT0391000.1 7 Osa07LNG0391000 26962931-26967260 long non-coding(lnc) isoforms of known genes 1955 60.92072 5
Osa07LNT0391000.2 7 Osa07LNG0391000 26962931-26967260 sense lncRNA 4084 49.11851 4
Osa07LNT0391100.1 7 Osa07LNG0391100 26978363-26983862 long non-coding(lnc) isoforms of known genes 2839 41.35259 3
Osa07LNT0391200.1 7 Osa07LNG0391200 27029455-27035256 long non-coding(lnc) isoforms of known genes 1578 47.3384 12
Osa07LNT0391300.2 7 Osa07LNG0391300 27050884-27054775 long non-coding(lnc) isoforms of known genes 1519 48.51876 12
Osa07LNT0391300.1 7 Osa07LNG0391300 27050884-27054775 long non-coding(lnc) isoforms of known genes 1614 48.57497 11
Osa07LNT0366000.2 7 Osa07LNG0366000 2711540-2713072 intergenetic lncRNA (lincRNA) 682 53.07918 3
Osa07LNT0366000.1 7 Osa07LNG0366000 2711540-2713072 intergenetic lncRNA (lincRNA) 843 51.60142 3
Osa07LNT0366100.1 7 Osa07LNG0366100 2727005-2730136 long non-coding(lnc) isoforms of known genes 1802 57.43618 2
Osa07LNT0391400.1 7 Osa07LNG0391400 27459323-27459544 intergenetic lncRNA (lincRNA) 222 46.3964 1
Osa07LNT0391500.1 7 Osa07LNG0391500 27465245-27466108 intergenetic lncRNA (lincRNA) 780 52.4359 2
Osa07LNT0391600.1 7 Osa07LNG0391600 27701512-27705200 long non-coding(lnc) isoforms of known genes 1229 46.786 9
Osa07LNT0391700.2 7 Osa07LNG0391700 27774777-27777989 sense lncRNA 871 49.48335 7
Osa07LNT0391700.1 7 Osa07LNG0391700 27774777-27777989 sense lncRNA 886 49.43567 7
Osa07LNT0391800.1 7 Osa07LNG0391800 27791113-27798140 long non-coding(lnc) isoforms of known genes 4432 42.84747 15
Osa07LNT0391900.1 7 Osa07LNG0391900 27823831-27824495 sense lncRNA 466 44.4206 2
Osa07LNT0392000.1 7 Osa07LNG0392000 27841401-27845395 long non-coding(lnc) isoforms of known genes 1995 48.92231 9
Osa07LNT0392100.1 7 Osa07LNG0392100 27868843-27876569 long non-coding(lnc) isoforms of known genes 3230 44.73684 10
Osa07LNT0392200.1 7 Osa07LNG0392200 27902457-27912642 sense lncRNA 6859 45.82301 10
Osa07LNT0392400.1 7 Osa07LNG0392400 27915306-27921192 long non-coding(lnc) isoforms of known genes 1717 45.71928 6
Osa07LNT0392400.2 7 Osa07LNG0392400 27915306-27921192 long non-coding(lnc) isoforms of known genes 1029 48.49368 6
Osa07LNT0392300.1 7 Osa07LNG0392300 27922793-27924603 long non-coding(lnc) isoforms of known genes 756 44.31217 4