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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0367400.1 7 Osa07LNG0367400 3561191-3567985 long non-coding(lnc) isoforms of known genes 3193 46.50799 8
Osa07LNT0367500.1 7 Osa07LNG0367500 3620155-3630778 long non-coding(lnc) isoforms of known genes 1508 45.82228 5
Osa07LNT0367600.1 7 Osa07LNG0367600 3726683-3731161 long non-coding(lnc) isoforms of known genes 2324 46.21343 8
Osa07LNT0367700.1 7 Osa07LNG0367700 3762425-3766436 long non-coding(lnc) isoforms of known genes 1341 56.97241 3
Osa07LNT0367800.1 7 Osa07LNG0367800 3847014-3850314 long non-coding(lnc) isoforms of known genes 2683 49.83228 3
Osa07LNT0367900.1 7 Osa07LNG0367900 3890681-3891073 intergenetic lncRNA (lincRNA) 393 58.01527 1
Osa07LNT0368000.1 7 Osa07LNG0368000 3957947-3960636 sense lncRNA 1694 50.53129 2
Osa07LNT0368100.1 7 Osa07LNG0368100 4111254-4113642 intergenetic lncRNA (lincRNA) 2389 40.68648 1
Osa07LNT0368300.1 7 Osa07LNG0368300 4151000-4156036 long non-coding(lnc) isoforms of known genes 2050 47.5122 11
Osa07LNT0368200.1 7 Osa07LNG0368200 4165436-4166615 intergenetic lncRNA (lincRNA) 1024 38.76953 2
Osa07LNT0368400.1 7 Osa07LNG0368400 4183064-4183265 intronic lncRNA 202 30.69307 1
Osa07LNT0368500.1 7 Osa07LNG0368500 4185365-4187968 long non-coding(lnc) isoforms of known genes 1231 49.79691 7
Osa07LNT0368600.2 7 Osa07LNG0368600 4191047-4195195 sense lncRNA 2027 42.42723 3
Osa07LNT0368600.1 7 Osa07LNG0368600 4191047-4195195 sense lncRNA 1559 42.52726 3
Osa07LNT0368600.3 7 Osa07LNG0368600 4191047-4195195 sense lncRNA 1843 42.37656 3
Osa07LNT0368700.1 7 Osa07LNG0368700 4253943-4258991 long non-coding(lnc) isoforms of known genes 1935 46.35659 11
Osa07LNT0523100.1 7 Osa07LNG0523100 4283183-4283443 intergenetic lncRNA (lincRNA) 261 29.11877 1
Osa07LNT0363500.1 7 Osa07LNG0363500 446195-453009 long non-coding(lnc) isoforms of known genes 3290 46.29179 15
Osa07LNT0363500.2 7 Osa07LNG0363500 446195-453009 long non-coding(lnc) isoforms of known genes 4032 45.70933 14
Osa07LNT0368800.1 7 Osa07LNG0368800 4503370-4507695 long non-coding(lnc) isoforms of known genes 1804 53.10421 6
Osa07LNT0368900.1 7 Osa07LNG0368900 4661648-4662736 long non-coding(lnc) isoforms of known genes 350 55.42857 3
Osa07LNT0369000.1 7 Osa07LNG0369000 4702978-4711329 long non-coding(lnc) isoforms of known genes 2690 50.1487 22
Osa07LNT0363400.1 7 Osa07LNG0363400 471352-477598 long non-coding(lnc) isoforms of known genes 1174 51.87394 8
Osa07LNT0369100.1 7 Osa07LNG0369100 4765046-4765264 intergenetic lncRNA (lincRNA) 219 47.48858 1
Osa07LNT0369200.1 7 Osa07LNG0369200 4868011-4877912 long non-coding(lnc) isoforms of known genes 2638 42.9113 17