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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0369300.1 7 Osa07LNG0369300 4880571-4888191 long non-coding(lnc) isoforms of known genes 3985 42.81054 8
Osa07LNT0369400.1 7 Osa07LNG0369400 4978007-4981651 long non-coding(lnc) isoforms of known genes 796 51.13065 3
Osa07LNT0369500.1 7 Osa07LNG0369500 4982708-4998237 intergenetic lncRNA (lincRNA) 2922 46.7488 6
Osa07LNT0369600.1 7 Osa07LNG0369600 4994547-4995918 intergenetic lncRNA (lincRNA) 1372 45.04373 1
Osa07LNT0523200.1 7 Osa07LNG0523200 5087266-5087491 intergenetic lncRNA (lincRNA) 226 35.84071 1
Osa07LNT0369700.1 7 Osa07LNG0369700 5113761-5116593 sense lncRNA 2024 42.04545 2
Osa07LNT0369800.1 7 Osa07LNG0369800 5145086-5148759 long non-coding(lnc) isoforms of known genes 1209 47.97353 8
Osa07LNT0369900.1 7 Osa07LNG0369900 5179090-5182743 long non-coding(lnc) isoforms of known genes 2076 47.54335 7
Osa07LNT0363600.2 7 Osa07LNG0363600 526053-534257 long non-coding(lnc) isoforms of known genes 2720 48.67647 12
Osa07LNT0363600.1 7 Osa07LNG0363600 526053-534257 long non-coding(lnc) isoforms of known genes 3091 47.49272 11
Osa07LNT0523300.1 7 Osa07LNG0523300 5275938-5276211 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa07LNT0523400.1 7 Osa07LNG0523400 5275938-5276211 intergenetic lncRNA (lincRNA) 274 27.73723 1
Osa07LNT0370100.1 7 Osa07LNG0370100 5276947-5279193 sense lncRNA 2137 40.99204 2
Osa07LNT0370100.2 7 Osa07LNG0370100 5276947-5279193 sense lncRNA 1768 42.19457 3
Osa07LNT0523600.1 7 Osa07LNG0523600 5298510-5298752 intergenetic lncRNA (lincRNA) 243 22.63374 1
Osa07LNT0523500.1 7 Osa07LNG0523500 5298510-5298752 intergenetic lncRNA (lincRNA) 243 22.63374 1
Osa07LNT0370000.1 7 Osa07LNG0370000 5298977-5299789 intergenetic lncRNA (lincRNA) 716 50.0 2
Osa07LNT0523700.1 7 Osa07LNG0523700 5300634-5300908 intergenetic lncRNA (lincRNA) 275 29.45455 1
Osa07LNT0523800.1 7 Osa07LNG0523800 5300634-5300908 intergenetic lncRNA (lincRNA) 275 29.45455 1
Osa07LNT0370200.1 7 Osa07LNG0370200 5418770-5426171 long non-coding(lnc) isoforms of known genes 2636 43.66464 6
Osa07LNT0370400.1 7 Osa07LNG0370400 5448542-5449040 intergenetic lncRNA (lincRNA) 499 44.08818 1
Osa07LNT0370300.1 7 Osa07LNG0370300 5448542-5451494 sense lncRNA 800 45.5 2
Osa07LNT0370300.2 7 Osa07LNG0370300 5448542-5451494 sense lncRNA 795 45.53459 2
Osa07LNT0370500.1 7 Osa07LNG0370500 5567714-5580491 long non-coding(lnc) isoforms of known genes 4461 45.12441 15
Osa07LNT0370600.1 7 Osa07LNG0370600 5592500-5596412 Antisense lncRNA 953 46.16999 4