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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa07LNT0372900.1 7 Osa07LNG0372900 8078976-8082653 long non-coding(lnc) isoforms of known genes 1891 46.27181 7
Osa07LNT0373000.1 7 Osa07LNG0373000 8264833-8278955 long non-coding(lnc) isoforms of known genes 1811 46.76974 12
Osa07LNT0373100.1 7 Osa07LNG0373100 8321651-8325048 long non-coding(lnc) isoforms of known genes 2792 48.88968 4
Osa07LNT0373200.1 7 Osa07LNG0373200 8334409-8337966 long non-coding(lnc) isoforms of known genes 1697 61.75604 5
Osa07LNT0373300.1 7 Osa07LNG0373300 8679295-8683072 intergenetic lncRNA (lincRNA) 1097 49.95442 4
Osa07LNT0373400.1 7 Osa07LNG0373400 8702233-8706909 long non-coding(lnc) isoforms of known genes 2161 54.37298 5
Osa07LNT0373500.1 7 Osa07LNG0373500 8812234-8815314 long non-coding(lnc) isoforms of known genes 936 50.32051 8
Osa07LNT0373600.2 7 Osa07LNG0373600 8930095-8943847 long non-coding(lnc) isoforms of known genes 4524 42.15296 25
Osa07LNT0373600.1 7 Osa07LNG0373600 8930095-8943847 long non-coding(lnc) isoforms of known genes 4609 42.15665 25
Osa07LNT0373700.1 7 Osa07LNG0373700 8993721-8997251 long non-coding(lnc) isoforms of known genes 1892 50.05285 8
Osa07LNT0373800.1 7 Osa07LNG0373800 9071611-9077790 long non-coding(lnc) isoforms of known genes 4886 41.95661 5
Osa07LNT0363800.1 7 Osa07LNG0363800 925097-931502 sense lncRNA 6134 45.04402 3
Osa07LNT0373900.1 7 Osa07LNG0373900 9460566-9473894 long non-coding(lnc) isoforms of known genes 3333 45.69457 23
Osa08LNT0550400.1 8 Osa08LNG0550400 10035211-10035484 intergenetic lncRNA (lincRNA) 274 29.56204 1
Osa08LNT0550300.1 8 Osa08LNG0550300 10035211-10035484 intergenetic lncRNA (lincRNA) 274 29.56204 1
Osa08LNT0546100.1 8 Osa08LNG0546100 100419-100654 intergenetic lncRNA (lincRNA) 236 23.30508 1
Osa08LNT0550600.1 8 Osa08LNG0550600 10055805-10056079 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0550500.1 8 Osa08LNG0550500 10055805-10056079 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa08LNT0406400.1 8 Osa08LNG0406400 10084785-10088210 intergenetic lncRNA (lincRNA) 1949 46.38276 4
Osa08LNT0406400.2 8 Osa08LNG0406400 10084785-10088210 intergenetic lncRNA (lincRNA) 2325 44.04301 3
Osa08LNT0550700.1 8 Osa08LNG0550700 10088685-10088900 intergenetic lncRNA (lincRNA) 216 23.61111 1
Osa08LNT0406600.1 8 Osa08LNG0406600 10269099-10270739 sense lncRNA 1153 52.81873 2
Osa08LNT0406500.1 8 Osa08LNG0406500 10296961-10300697 sense lncRNA 1153 52.732 2
Osa08LNT0406700.2 8 Osa08LNG0406700 10361690-10364219 long non-coding(lnc) isoforms of known genes 1083 47.18375 4
Osa08LNT0406700.1 8 Osa08LNG0406700 10361690-10364219 long non-coding(lnc) isoforms of known genes 1164 46.90722 4