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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0550800.1 8 Osa08LNG0550800 10547747-10548020 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa08LNT0550900.1 8 Osa08LNG0550900 10547747-10548020 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa08LNT0406800.1 8 Osa08LNG0406800 10600809-10601262 intergenetic lncRNA (lincRNA) 454 60.13216 1
Osa08LNT0406900.2 8 Osa08LNG0406900 10621769-10625430 long non-coding(lnc) isoforms of known genes 2337 45.99914 5
Osa08LNT0406900.1 8 Osa08LNG0406900 10621769-10625430 long non-coding(lnc) isoforms of known genes 2556 45.22692 5
Osa08LNT0407000.1 8 Osa08LNG0407000 10633640-10639603 long non-coding(lnc) isoforms of known genes 2109 50.3082 4
Osa08LNT0407000.2 8 Osa08LNG0407000 10633640-10639603 long non-coding(lnc) isoforms of known genes 2080 50.04808 4
Osa08LNT0551000.1 8 Osa08LNG0551000 10890115-10890389 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa08LNT0551100.1 8 Osa08LNG0551100 10890115-10890390 intergenetic lncRNA (lincRNA) 276 26.81159 1
Osa08LNT0407100.1 8 Osa08LNG0407100 11055447-11062439 long non-coding(lnc) isoforms of known genes 1955 44.34783 6
Osa08LNT0407200.2 8 Osa08LNG0407200 11074045-11077072 long non-coding(lnc) isoforms of known genes 2131 40.77898 3
Osa08LNT0407200.1 8 Osa08LNG0407200 11074045-11077072 long non-coding(lnc) isoforms of known genes 2136 40.82397 3
Osa08LNT0396300.1 8 Osa08LNG0396300 1117872-1119151 Antisense lncRNA 236 47.0339 2
Osa08LNT0396400.1 8 Osa08LNG0396400 1121772-1126426 long non-coding(lnc) isoforms of known genes 2902 48.86285 3
Osa08LNT0407300.1 8 Osa08LNG0407300 11271264-11272444 intergenetic lncRNA (lincRNA) 1181 63.16681 1
Osa08LNT0407400.1 8 Osa08LNG0407400 11274716-11279209 long non-coding(lnc) isoforms of known genes 2207 48.43679 10
Osa08LNT0551300.1 8 Osa08LNG0551300 11437347-11437570 intergenetic lncRNA (lincRNA) 224 29.01786 1
Osa08LNT0551200.1 8 Osa08LNG0551200 11437347-11437570 intergenetic lncRNA (lincRNA) 224 29.01786 1
Osa08LNT0407500.1 8 Osa08LNG0407500 11438020-11440989 long non-coding(lnc) isoforms of known genes 2780 46.00719 3
Osa08LNT0407600.1 8 Osa08LNG0407600 11463136-11468530 long non-coding(lnc) isoforms of known genes 2316 51.59758 6
Osa08LNT0407700.1 8 Osa08LNG0407700 11548031-11554951 long non-coding(lnc) isoforms of known genes 3994 46.61993 5
Osa08LNT0407700.2 8 Osa08LNG0407700 11548031-11554951 long non-coding(lnc) isoforms of known genes 3608 47.36696 5
Osa08LNT0407800.1 8 Osa08LNG0407800 11558502-11563711 long non-coding(lnc) isoforms of known genes 2824 42.70538 11
Osa08LNT0551400.1 8 Osa08LNG0551400 11610472-11610747 intergenetic lncRNA (lincRNA) 276 25.36232 1
Osa08LNT0551600.1 8 Osa08LNG0551600 11611549-11611801 intergenetic lncRNA (lincRNA) 253 26.08696 1