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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0409300.2 8 Osa08LNG0409300 14160129-14162426 intergenetic lncRNA (lincRNA) 927 49.83819 3
Osa08LNT0409300.1 8 Osa08LNG0409300 14160129-14162426 intergenetic lncRNA (lincRNA) 866 50.11547 3
Osa08LNT0409500.1 8 Osa08LNG0409500 14167856-14178849 long non-coding(lnc) isoforms of known genes 3657 43.97047 14
Osa08LNT0409600.1 8 Osa08LNG0409600 14186171-14195420 long non-coding(lnc) isoforms of known genes 3926 46.38309 13
Osa08LNT0552200.1 8 Osa08LNG0552200 14267186-14267418 intergenetic lncRNA (lincRNA) 233 41.6309 1
Osa08LNT0409700.1 8 Osa08LNG0409700 14320904-14328132 long non-coding(lnc) isoforms of known genes 2447 50.0613 4
Osa08LNT0409700.2 8 Osa08LNG0409700 14320904-14328132 long non-coding(lnc) isoforms of known genes 6643 41.38191 3
Osa08LNT0409800.1 8 Osa08LNG0409800 14374686-14377049 long non-coding(lnc) isoforms of known genes 747 50.46854 3
Osa08LNT0409900.1 8 Osa08LNG0409900 14681327-14682670 intergenetic lncRNA (lincRNA) 1005 42.88557 2
Osa08LNT0410000.1 8 Osa08LNG0410000 14702695-14704280 long non-coding(lnc) isoforms of known genes 1111 52.65527 5
Osa08LNT0410100.1 8 Osa08LNG0410100 14714744-14721301 long non-coding(lnc) isoforms of known genes 6336 43.26073 3
Osa08LNT0410200.1 8 Osa08LNG0410200 14724938-14731989 long non-coding(lnc) isoforms of known genes 2139 50.07013 13
Osa08LNT0410300.1 8 Osa08LNG0410300 14981455-14992326 long non-coding(lnc) isoforms of known genes 3715 44.68371 27
Osa08LNT0552300.1 8 Osa08LNG0552300 15056925-15057179 intergenetic lncRNA (lincRNA) 255 27.45098 1
Osa08LNT0546200.1 8 Osa08LNG0546200 1509983-1510338 intergenetic lncRNA (lincRNA) 356 29.21348 1
Osa08LNT0552400.1 8 Osa08LNG0552400 15171945-15172204 intergenetic lncRNA (lincRNA) 260 41.92308 1
Osa08LNT0552600.1 8 Osa08LNG0552600 15172572-15172846 intergenetic lncRNA (lincRNA) 275 22.90909 1
Osa08LNT0552500.1 8 Osa08LNG0552500 15172572-15172846 intergenetic lncRNA (lincRNA) 275 22.90909 1
Osa08LNT0552700.1 8 Osa08LNG0552700 15172913-15173157 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa08LNT0552800.1 8 Osa08LNG0552800 15172913-15173157 intergenetic lncRNA (lincRNA) 245 27.7551 1
Osa08LNT0410400.1 8 Osa08LNG0410400 15199790-15201794 long non-coding(lnc) isoforms of known genes 1769 49.80215 3
Osa08LNT0410600.1 8 Osa08LNG0410600 15203206-15211913 long non-coding(lnc) isoforms of known genes 2440 44.05738 19
Osa08LNT0410500.1 8 Osa08LNG0410500 15232911-15236363 long non-coding(lnc) isoforms of known genes 1514 45.97094 5
Osa08LNT0410700.1 8 Osa08LNG0410700 15439137-15450255 long non-coding(lnc) isoforms of known genes 3698 43.91563 17
Osa08LNT0396600.1 8 Osa08LNG0396600 1567554-1574379 sense lncRNA 3265 48.66769 10