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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0553900.1 8 Osa08LNG0553900 16816394-16816637 intergenetic lncRNA (lincRNA) 244 27.04918 1
Osa08LNT0411500.1 8 Osa08LNG0411500 16836423-16839562 long non-coding(lnc) isoforms of known genes 893 48.48824 4
Osa08LNT0411600.1 8 Osa08LNG0411600 16854918-16856201 intergenetic lncRNA (lincRNA) 1284 35.82555 1
Osa08LNT0411700.1 8 Osa08LNG0411700 16916651-16917450 intergenetic lncRNA (lincRNA) 708 46.0452 2
Osa08LNT0397000.1 8 Osa08LNG0397000 1716498-1719881 long non-coding(lnc) isoforms of known genes 1862 49.51665 10
Osa08LNT0411800.1 8 Osa08LNG0411800 17204994-17209448 long non-coding(lnc) isoforms of known genes 1240 46.29032 15
Osa08LNT0411800.2 8 Osa08LNG0411800 17204994-17209448 long non-coding(lnc) isoforms of known genes 1247 46.35124 15
Osa08LNT0395100.1 8 Osa08LNG0395100 172099-179456 long non-coding(lnc) isoforms of known genes 2119 47.19207 13
Osa08LNT0411900.2 8 Osa08LNG0411900 17214004-17221237 long non-coding(lnc) isoforms of known genes 2860 45.48951 9
Osa08LNT0411900.1 8 Osa08LNG0411900 17214004-17221237 long non-coding(lnc) isoforms of known genes 3105 44.38003 9
Osa08LNT0411900.3 8 Osa08LNG0411900 17214004-17221237 long non-coding(lnc) isoforms of known genes 2392 43.97993 8
Osa08LNT0554000.1 8 Osa08LNG0554000 17326620-17326870 intergenetic lncRNA (lincRNA) 251 25.89641 1
Osa08LNT0554100.1 8 Osa08LNG0554100 17326620-17326870 intergenetic lncRNA (lincRNA) 251 25.89641 1
Osa08LNT0412000.1 8 Osa08LNG0412000 17518379-17523073 long non-coding(lnc) isoforms of known genes 1158 47.84111 7
Osa08LNT0554200.1 8 Osa08LNG0554200 17902226-17902483 intergenetic lncRNA (lincRNA) 258 27.51938 1
Osa08LNT0554300.1 8 Osa08LNG0554300 17902226-17902483 intergenetic lncRNA (lincRNA) 258 27.51938 1
Osa08LNT0397100.1 8 Osa08LNG0397100 1807399-1809499 intergenetic lncRNA (lincRNA) 410 45.36585 3
Osa08LNT0412100.1 8 Osa08LNG0412100 18146367-18149400 long non-coding(lnc) isoforms of known genes 2348 45.48552 2
Osa08LNT0554500.1 8 Osa08LNG0554500 18168032-18168308 intergenetic lncRNA (lincRNA) 277 26.35379 1
Osa08LNT0554400.1 8 Osa08LNG0554400 18168032-18168308 intergenetic lncRNA (lincRNA) 277 26.35379 1
Osa08LNT0412200.1 8 Osa08LNG0412200 18168729-18172195 long non-coding(lnc) isoforms of known genes 1699 49.0877 4
Osa08LNT0412600.1 8 Osa08LNG0412600 18457614-18462328 Antisense lncRNA 735 55.10204 4
Osa08LNT0412300.2 8 Osa08LNG0412300 18465910-18467911 intergenetic lncRNA (lincRNA) 1404 49.78632 2
Osa08LNT0412300.1 8 Osa08LNG0412300 18465910-18467911 intergenetic lncRNA (lincRNA) 2002 46.55345 1
Osa08LNT0412400.1 8 Osa08LNG0412400 18527587-18530505 long non-coding(lnc) isoforms of known genes 2732 36.89605 3