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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0412500.1 8 Osa08LNG0412500 18551080-18551688 intergenetic lncRNA (lincRNA) 609 56.81445 1
Osa08LNT0412800.1 8 Osa08LNG0412800 18605035-18605467 intergenetic lncRNA (lincRNA) 433 51.50115 1
Osa08LNT0412700.1 8 Osa08LNG0412700 18652234-18653256 intergenetic lncRNA (lincRNA) 1023 56.30499 1
Osa08LNT0554600.1 8 Osa08LNG0554600 18677851-18678079 intronic lncRNA 229 25.32751 1
Osa08LNT0554700.1 8 Osa08LNG0554700 18677854-18678076 intronic lncRNA 223 25.56054 1
Osa08LNT0412900.1 8 Osa08LNG0412900 18770303-18771442 sense lncRNA 578 45.32872 2
Osa08LNT0413000.1 8 Osa08LNG0413000 18960129-18966328 long non-coding(lnc) isoforms of known genes 3202 47.18926 17
Osa08LNT0395200.1 8 Osa08LNG0395200 190890-194937 long non-coding(lnc) isoforms of known genes 2835 41.55203 4
Osa08LNT0397200.1 8 Osa08LNG0397200 1918183-1920105 intergenetic lncRNA (lincRNA) 449 47.21604 3
Osa08LNT0397300.1 8 Osa08LNG0397300 1922039-1923667 long non-coding(lnc) isoforms of known genes 653 44.56355 3
Osa08LNT0554800.1 8 Osa08LNG0554800 19318534-19318740 intergenetic lncRNA (lincRNA) 207 23.18841 1
Osa08LNT0555000.1 8 Osa08LNG0555000 19409951-19410224 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa08LNT0554900.1 8 Osa08LNG0554900 19409951-19410224 intergenetic lncRNA (lincRNA) 274 31.38686 1
Osa08LNT0555200.1 8 Osa08LNG0555200 19514317-19514591 intergenetic lncRNA (lincRNA) 275 27.27273 1
Osa08LNT0555100.1 8 Osa08LNG0555100 19514317-19514591 intergenetic lncRNA (lincRNA) 275 27.27273 1
Osa08LNT0413100.1 8 Osa08LNG0413100 19672758-19676618 long non-coding(lnc) isoforms of known genes 1929 47.79679 8
Osa08LNT0413200.1 8 Osa08LNG0413200 19703238-19707972 long non-coding(lnc) isoforms of known genes 1978 47.21941 4
Osa08LNT0413300.1 8 Osa08LNG0413300 19775406-19779975 long non-coding(lnc) isoforms of known genes 2616 59.17431 4
Osa08LNT0413400.4 8 Osa08LNG0413400 19912856-19918776 long non-coding(lnc) isoforms of known genes 3107 48.79305 6
Osa08LNT0413400.1 8 Osa08LNG0413400 19912856-19918776 long non-coding(lnc) isoforms of known genes 3755 47.50999 8
Osa08LNT0413400.2 8 Osa08LNG0413400 19912856-19918776 long non-coding(lnc) isoforms of known genes 4066 46.99951 6
Osa08LNT0413400.3 8 Osa08LNG0413400 19912856-19918776 long non-coding(lnc) isoforms of known genes 3688 47.20716 8
Osa08LNT0555300.1 8 Osa08LNG0555300 19925465-19925709 intergenetic lncRNA (lincRNA) 245 26.12245 1
Osa08LNT0555400.1 8 Osa08LNG0555400 19925465-19925709 intergenetic lncRNA (lincRNA) 245 26.12245 1
Osa08LNT0413500.1 8 Osa08LNG0413500 19950692-19952388 long non-coding(lnc) isoforms of known genes 1607 58.05849 2