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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0414900.1 8 Osa08LNG0414900 21025547-21029093 long non-coding(lnc) isoforms of known genes 1579 55.9848 4
Osa08LNT0395400.1 8 Osa08LNG0395400 210568-212253 long non-coding(lnc) isoforms of known genes 1562 52.36876 2
Osa08LNT0397600.1 8 Osa08LNG0397600 2111196-2112027 sense lncRNA 669 36.02392 2
Osa08LNT0415000.1 8 Osa08LNG0415000 21164639-21169759 long non-coding(lnc) isoforms of known genes 2331 55.34106 6
Osa08LNT0415000.2 8 Osa08LNG0415000 21164639-21169759 long non-coding(lnc) isoforms of known genes 2274 55.40897 7
Osa08LNT0415100.1 8 Osa08LNG0415100 21173501-21176249 long non-coding(lnc) isoforms of known genes 1462 44.18605 7
Osa08LNT0415100.2 8 Osa08LNG0415100 21173501-21176249 long non-coding(lnc) isoforms of known genes 2431 46.40066 9
Osa08LNT0556200.1 8 Osa08LNG0556200 21313799-21314026 intergenetic lncRNA (lincRNA) 228 30.70175 1
Osa08LNT0556300.1 8 Osa08LNG0556300 21313801-21314024 intergenetic lncRNA (lincRNA) 224 30.35714 1
Osa08LNT0415200.2 8 Osa08LNG0415200 21450964-21456018 long non-coding(lnc) isoforms of known genes 1711 39.45061 8
Osa08LNT0415200.1 8 Osa08LNG0415200 21450964-21456018 long non-coding(lnc) isoforms of known genes 2037 47.07904 10
Osa08LNT0415300.2 8 Osa08LNG0415300 21765470-21770635 long non-coding(lnc) isoforms of known genes 3785 41.63804 5
Osa08LNT0415300.1 8 Osa08LNG0415300 21765470-21770635 long non-coding(lnc) isoforms of known genes 3857 42.6238 5
Osa08LNT0397700.1 8 Osa08LNG0397700 2178165-2180179 long non-coding(lnc) isoforms of known genes 1192 53.10403 5
Osa08LNT0397700.2 8 Osa08LNG0397700 2178165-2180179 long non-coding(lnc) isoforms of known genes 1200 53.0 5
Osa08LNT0415400.1 8 Osa08LNG0415400 21842124-21846835 long non-coding(lnc) isoforms of known genes 1547 50.35553 10
Osa08LNT0415500.1 8 Osa08LNG0415500 21921124-21924247 sense lncRNA 2391 41.44709 4
Osa08LNT0415700.1 8 Osa08LNG0415700 21951752-21955522 long non-coding(lnc) isoforms of known genes 3389 38.94954 4
Osa08LNT0415700.2 8 Osa08LNG0415700 21951752-21955522 long non-coding(lnc) isoforms of known genes 2581 41.1081 4
Osa08LNT0397800.1 8 Osa08LNG0397800 2195266-2196158 intergenetic lncRNA (lincRNA) 893 48.60022 1
Osa08LNT0415600.1 8 Osa08LNG0415600 21970243-21973220 intergenetic lncRNA (lincRNA) 2978 47.88449 1
Osa08LNT0415800.1 8 Osa08LNG0415800 22010621-22010841 intronic lncRNA 221 33.93665 1
Osa08LNT0415900.2 8 Osa08LNG0415900 22054013-22067125 long non-coding(lnc) isoforms of known genes 2079 45.88745 13
Osa08LNT0415900.1 8 Osa08LNG0415900 22054013-22067125 long non-coding(lnc) isoforms of known genes 2190 45.34247 12
Osa08LNT0416100.3 8 Osa08LNG0416100 22082679-22093734 long non-coding(lnc) isoforms of known genes 4012 46.80957 21