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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0422600.1 8 Osa08LNG0422600 27062916-27064362 intergenetic lncRNA (lincRNA) 1221 44.88124 2
Osa08LNT0422600.2 8 Osa08LNG0422600 27062916-27064362 intergenetic lncRNA (lincRNA) 723 49.51591 3
Osa08LNT0422700.1 8 Osa08LNG0422700 27123639-27127540 long non-coding(lnc) isoforms of known genes 1849 44.6728 13
Osa08LNT0422800.1 8 Osa08LNG0422800 27210576-27217016 long non-coding(lnc) isoforms of known genes 3030 49.60396 16
Osa08LNT0558000.1 8 Osa08LNG0558000 27300802-27301058 intergenetic lncRNA (lincRNA) 257 27.62646 1
Osa08LNT0422900.2 8 Osa08LNG0422900 27356438-27358774 long non-coding(lnc) isoforms of known genes 1519 58.85451 2
Osa08LNT0422900.1 8 Osa08LNG0422900 27356438-27358774 long non-coding(lnc) isoforms of known genes 1931 48.88659 3
Osa08LNT0423000.1 8 Osa08LNG0423000 27372908-27375513 intergenetic lncRNA (lincRNA) 1760 46.42045 4
Osa08LNT0423000.2 8 Osa08LNG0423000 27372908-27375513 intergenetic lncRNA (lincRNA) 1727 46.61262 3
Osa08LNT0423300.1 8 Osa08LNG0423300 27435126-27442740 long non-coding(lnc) isoforms of known genes 3379 46.49305 14
Osa08LNT0423100.1 8 Osa08LNG0423100 27457339-27460106 sense lncRNA 2680 54.47761 2
Osa08LNT0423200.1 8 Osa08LNG0423200 27486398-27493091 long non-coding(lnc) isoforms of known genes 2792 45.45129 3
Osa08LNT0423400.1 8 Osa08LNG0423400 27519470-27520001 Antisense lncRNA 420 61.90476 2
Osa08LNT0423500.1 8 Osa08LNG0423500 27548041-27549173 intergenetic lncRNA (lincRNA) 1133 58.78199 1
Osa08LNT0423600.1 8 Osa08LNG0423600 27629503-27631037 sense lncRNA 1457 48.66163 2
Osa08LNT0423700.2 8 Osa08LNG0423700 27644016-27648449 sense lncRNA 887 41.48816 2
Osa08LNT0423700.1 8 Osa08LNG0423700 27644016-27648449 sense lncRNA 242 54.54545 2
Osa08LNT0558100.1 8 Osa08LNG0558100 27760818-27761049 intergenetic lncRNA (lincRNA) 232 28.01724 1
Osa08LNT0423800.1 8 Osa08LNG0423800 27825033-27830293 long non-coding(lnc) isoforms of known genes 2545 47.42633 10
Osa08LNT0423900.2 8 Osa08LNG0423900 27859063-27868317 long non-coding(lnc) isoforms of known genes 3967 43.83665 18
Osa08LNT0423900.1 8 Osa08LNG0423900 27859063-27868317 long non-coding(lnc) isoforms of known genes 3051 46.11603 19
Osa08LNT0398400.1 8 Osa08LNG0398400 2786227-2792182 long non-coding(lnc) isoforms of known genes 2269 45.13001 14
Osa08LNT0424100.1 8 Osa08LNG0424100 27942714-27948818 long non-coding(lnc) isoforms of known genes 3358 48.0941 23
Osa08LNT0424000.1 8 Osa08LNG0424000 27968355-27970704 long non-coding(lnc) isoforms of known genes 1178 46.60441 2
Osa08LNT0424200.1 8 Osa08LNG0424200 28059345-28061198 long non-coding(lnc) isoforms of known genes 1600 52.625 2