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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0424300.1 8 Osa08LNG0424300 28123306-28126252 long non-coding(lnc) isoforms of known genes 2122 51.50801 6
Osa08LNT0424300.2 8 Osa08LNG0424300 28123306-28126252 long non-coding(lnc) isoforms of known genes 2485 49.53722 6
Osa08LNT0398500.1 8 Osa08LNG0398500 2813235-2815972 intergenetic lncRNA (lincRNA) 1685 46.23145 5
Osa08LNT0424500.1 8 Osa08LNG0424500 28173373-28181759 long non-coding(lnc) isoforms of known genes 3278 43.59365 30
Osa08LNT0424500.2 8 Osa08LNG0424500 28173373-28181759 long non-coding(lnc) isoforms of known genes 3473 44.14051 33
Osa08LNT0424400.1 8 Osa08LNG0424400 28208778-28211676 long non-coding(lnc) isoforms of known genes 729 44.30727 4
Osa08LNT0424600.1 8 Osa08LNG0424600 28356138-28360999 long non-coding(lnc) isoforms of known genes 1290 60.54264 3
Osa08LNT0398600.1 8 Osa08LNG0398600 2909637-2912538 long non-coding(lnc) isoforms of known genes 1757 44.62151 5
Osa08LNT0398700.1 8 Osa08LNG0398700 3013807-3016330 long non-coding(lnc) isoforms of known genes 1693 46.95806 3
Osa08LNT0398800.1 8 Osa08LNG0398800 3022668-3025948 long non-coding(lnc) isoforms of known genes 1244 44.2926 8
Osa08LNT0398900.1 8 Osa08LNG0398900 3031282-3043433 long non-coding(lnc) isoforms of known genes 3857 40.73114 27
Osa08LNT0398900.2 8 Osa08LNG0398900 3031282-3043433 long non-coding(lnc) isoforms of known genes 3362 41.01725 27
Osa08LNT0399000.1 8 Osa08LNG0399000 3117825-3118313 intergenetic lncRNA (lincRNA) 489 46.42127 1
Osa08LNT0399100.1 8 Osa08LNG0399100 3224341-3233837 long non-coding(lnc) isoforms of known genes 5920 45.72635 14
Osa08LNT0399200.1 8 Osa08LNG0399200 3318571-3318924 intergenetic lncRNA (lincRNA) 354 59.03955 1
Osa08LNT0399300.1 8 Osa08LNG0399300 3382554-3387003 long non-coding(lnc) isoforms of known genes 3554 42.03714 3
Osa08LNT0399500.1 8 Osa08LNG0399500 3460798-3463758 long non-coding(lnc) isoforms of known genes 906 48.45475 6
Osa08LNT0399500.2 8 Osa08LNG0399500 3460798-3463758 long non-coding(lnc) isoforms of known genes 994 47.58551 7
Osa08LNT0399400.1 8 Osa08LNG0399400 3508751-3512202 long non-coding(lnc) isoforms of known genes 1575 60.57143 3
Osa08LNT0399600.1 8 Osa08LNG0399600 3514010-3518732 long non-coding(lnc) isoforms of known genes 4312 50.18553 4
Osa08LNT0395500.1 8 Osa08LNG0395500 361169-366553 long non-coding(lnc) isoforms of known genes 1863 43.42458 10
Osa08LNT0399700.1 8 Osa08LNG0399700 3832619-3834999 sense lncRNA 539 48.23748 2
Osa08LNT0399800.1 8 Osa08LNG0399800 3960688-3960922 intergenetic lncRNA (lincRNA) 235 24.25532 1
Osa08LNT0399900.1 8 Osa08LNG0399900 4175878-4178531 sense lncRNA 1140 52.36842 8
Osa08LNT0400000.1 8 Osa08LNG0400000 4211520-4212904 sense lncRNA 1307 67.48279 2