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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa01LNT0462200.1 1 Osa01LNG0462200 40818892-40819148 intergenetic lncRNA (lincRNA) 257 27.62646 1
Osa01LNT0462300.1 1 Osa01LNG0462300 40818892-40819148 intergenetic lncRNA (lincRNA) 257 27.62646 1
Osa01LNT0054500.2 1 Osa01LNG0054500 40858575-40861675 long non-coding(lnc) isoforms of known genes 1656 52.17391 12
Osa01LNT0054500.1 1 Osa01LNG0054500 40858575-40861675 long non-coding(lnc) isoforms of known genes 1912 49.58159 11
Osa01LNT0054600.1 1 Osa01LNG0054600 40864921-40868344 long non-coding(lnc) isoforms of known genes 2437 47.02503 6
Osa01LNT0054700.1 1 Osa01LNG0054700 40935408-40935913 intergenetic lncRNA (lincRNA) 506 46.64032 1
Osa01LNT0054900.2 1 Osa01LNG0054900 40937852-40940996 long non-coding(lnc) isoforms of known genes 1399 48.89207 5
Osa01LNT0054900.1 1 Osa01LNG0054900 40937852-40940996 long non-coding(lnc) isoforms of known genes 2437 43.373 5
Osa01LNT0054800.1 1 Osa01LNG0054800 40942545-40943105 sense lncRNA 371 49.86523 2
Osa01LNT0055000.1 1 Osa01LNG0055000 41007465-41008440 long non-coding(lnc) isoforms of known genes 904 61.17257 2
Osa01LNT0055100.1 1 Osa01LNG0055100 41067062-41073367 long non-coding(lnc) isoforms of known genes 2732 47.54758 15
Osa01LNT0055200.2 1 Osa01LNG0055200 41100496-41105054 long non-coding(lnc) isoforms of known genes 1567 45.11806 10
Osa01LNT0055200.1 1 Osa01LNG0055200 41100496-41105054 long non-coding(lnc) isoforms of known genes 1503 45.24285 11
Osa01LNT0055300.2 1 Osa01LNG0055300 41112089-41114856 long non-coding(lnc) isoforms of known genes 1562 56.01793 3
Osa01LNT0055300.1 1 Osa01LNG0055300 41112089-41114856 long non-coding(lnc) isoforms of known genes 1823 56.39057 2
Osa01LNT0055400.1 1 Osa01LNG0055400 41116407-41119190 long non-coding(lnc) isoforms of known genes 2096 46.04008 3
Osa01LNT0055500.1 1 Osa01LNG0055500 41155827-41165147 long non-coding(lnc) isoforms of known genes 6770 46.54357 9
Osa01LNT0055600.1 1 Osa01LNG0055600 41299751-41300158 intergenetic lncRNA (lincRNA) 408 47.79412 1
Osa01LNT0055700.1 1 Osa01LNG0055700 41305718-41314177 long non-coding(lnc) isoforms of known genes 1559 52.91854 9
Osa01LNT0055800.1 1 Osa01LNG0055800 41455791-41456884 sense lncRNA 807 43.49442 2
Osa01LNT0055900.1 1 Osa01LNG0055900 41486856-41494443 long non-coding(lnc) isoforms of known genes 4913 42.51985 11
Osa01LNT0056000.1 1 Osa01LNG0056000 41542086-41545857 long non-coding(lnc) isoforms of known genes 2617 42.75888 6
Osa01LNT0454700.1 1 Osa01LNG0454700 4157987-4158188 intergenetic lncRNA (lincRNA) 202 35.14851 1
Osa01LNT0005600.1 1 Osa01LNG0005600 4160566-4164399 long non-coding(lnc) isoforms of known genes 1100 46.63636 9
Osa01LNT0056100.1 1 Osa01LNG0056100 41728692-41729581 sense lncRNA 577 45.7539 3