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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa08LNT0550200.1 8 Osa08LNG0550200 9929896-9930170 intergenetic lncRNA (lincRNA) 275 28.36364 1
Osa09LNT0425200.1 9 Osa09LNG0425200 1001-9416 Antisense lncRNA 488 61.27049 2
Osa09LNT0425100.1 9 Osa09LNG0425100 1001-9416 sense lncRNA 488 61.27049 2
Osa09LNT0580600.1 9 Osa09LNG0580600 10124465-10124677 intergenetic lncRNA (lincRNA) 213 25.8216 1
Osa09LNT0580800.1 9 Osa09LNG0580800 10193453-10193694 intergenetic lncRNA (lincRNA) 242 26.8595 1
Osa09LNT0580700.1 9 Osa09LNG0580700 10193453-10193694 intergenetic lncRNA (lincRNA) 242 26.8595 1
Osa09LNT0580900.1 9 Osa09LNG0580900 10193765-10194030 intergenetic lncRNA (lincRNA) 266 29.69925 1
Osa09LNT0581000.1 9 Osa09LNG0581000 10193765-10194030 intergenetic lncRNA (lincRNA) 266 29.69925 1
Osa09LNT0433600.3 9 Osa09LNG0433600 10226022-10228864 intergenetic lncRNA (lincRNA) 1079 49.11956 4
Osa09LNT0433600.2 9 Osa09LNG0433600 10226022-10228864 intergenetic lncRNA (lincRNA) 909 51.48515 3
Osa09LNT0433600.1 9 Osa09LNG0433600 10226022-10228864 intergenetic lncRNA (lincRNA) 1736 43.08756 3
Osa09LNT0433900.1 9 Osa09LNG0433900 10399132-10405794 long non-coding(lnc) isoforms of known genes 2553 44.57501 9
Osa09LNT0433900.2 9 Osa09LNG0433900 10399132-10405794 long non-coding(lnc) isoforms of known genes 2381 44.72911 9
Osa09LNT0433900.3 9 Osa09LNG0433900 10399132-10405794 long non-coding(lnc) isoforms of known genes 1770 43.44633 8
Osa09LNT0433700.1 9 Osa09LNG0433700 10491279-10493399 intergenetic lncRNA (lincRNA) 1884 49.04459 2
Osa09LNT0434100.1 9 Osa09LNG0434100 10605026-10621833 long non-coding(lnc) isoforms of known genes 3325 41.26316 3
Osa09LNT0433800.1 9 Osa09LNG0433800 10626128-10626767 intergenetic lncRNA (lincRNA) 640 43.75 1
Osa09LNT0434000.1 9 Osa09LNG0434000 10749111-10750151 intergenetic lncRNA (lincRNA) 1041 54.17867 1
Osa09LNT0434200.1 9 Osa09LNG0434200 10807218-10807667 intergenetic lncRNA (lincRNA) 450 44.66667 1
Osa09LNT0434300.1 9 Osa09LNG0434300 10849769-10852021 long non-coding(lnc) isoforms of known genes 1133 41.48279 6
Osa09LNT0434400.2 9 Osa09LNG0434400 10872609-10877953 long non-coding(lnc) isoforms of known genes 1670 43.59281 8
Osa09LNT0434400.1 9 Osa09LNG0434400 10872609-10877953 long non-coding(lnc) isoforms of known genes 2141 41.98972 7
Osa09LNT0434700.1 9 Osa09LNG0434700 10928396-10930718 long non-coding(lnc) isoforms of known genes 1461 44.62697 9
Osa09LNT0434700.2 9 Osa09LNG0434700 10928396-10930718 long non-coding(lnc) isoforms of known genes 1348 45.54896 10
Osa09LNT0434500.1 9 Osa09LNG0434500 10977544-10981272 intergenetic lncRNA (lincRNA) 2202 50.09083 9