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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0438400.1 9 Osa09LNG0438400 14509080-14510125 intergenetic lncRNA (lincRNA) 1046 28.68069 1
Osa09LNT0438500.1 9 Osa09LNG0438500 14607519-14609835 long non-coding(lnc) isoforms of known genes 1613 54.9287 6
Osa09LNT0438700.1 9 Osa09LNG0438700 14677541-14680737 long non-coding(lnc) isoforms of known genes 1605 49.78193 4
Osa09LNT0438600.1 9 Osa09LNG0438600 14691187-14693114 long non-coding(lnc) isoforms of known genes 680 49.41176 4
Osa09LNT0426700.1 9 Osa09LNG0426700 1488712-1489312 intergenetic lncRNA (lincRNA) 601 54.07654 1
Osa09LNT0438900.1 9 Osa09LNG0438900 15076563-15077832 Antisense lncRNA 283 50.53004 3
Osa09LNT0438800.1 9 Osa09LNG0438800 15102248-15106479 intergenetic lncRNA (lincRNA) 565 44.42478 2
Osa09LNT0439000.1 9 Osa09LNG0439000 15204109-15207922 long non-coding(lnc) isoforms of known genes 1412 49.50425 7
Osa09LNT0439100.1 9 Osa09LNG0439100 15217290-15218672 intergenetic lncRNA (lincRNA) 606 39.60396 4
Osa09LNT0439200.1 9 Osa09LNG0439200 15349074-15352396 long non-coding(lnc) isoforms of known genes 2151 38.16829 5
Osa09LNT0439300.1 9 Osa09LNG0439300 15408300-15415085 sense lncRNA 4522 40.9111 9
Osa09LNT0439400.1 9 Osa09LNG0439400 15447741-15449982 long non-coding(lnc) isoforms of known genes 1510 52.78146 6
Osa09LNT0439500.1 9 Osa09LNG0439500 15450603-15456012 long non-coding(lnc) isoforms of known genes 1425 59.57895 7
Osa09LNT0576100.1 9 Osa09LNG0576100 1552360-1552592 intergenetic lncRNA (lincRNA) 233 43.77682 1
Osa09LNT0439600.1 9 Osa09LNG0439600 15549199-15549456 intergenetic lncRNA (lincRNA) 258 60.46512 1
Osa09LNT0439700.1 9 Osa09LNG0439700 15563768-15569456 long non-coding(lnc) isoforms of known genes 4055 41.10974 4
Osa09LNT0439800.1 9 Osa09LNG0439800 15599975-15600434 intronic lncRNA 460 30.65217 1
Osa09LNT0582200.1 9 Osa09LNG0582200 15671577-15671780 intergenetic lncRNA (lincRNA) 204 33.33333 1
Osa09LNT0439900.1 9 Osa09LNG0439900 15712107-15712719 intergenetic lncRNA (lincRNA) 613 60.19576 1
Osa09LNT0440000.1 9 Osa09LNG0440000 15937013-15943746 long non-coding(lnc) isoforms of known genes 3590 47.24234 16
Osa09LNT0440000.2 9 Osa09LNG0440000 15937013-15943746 long non-coding(lnc) isoforms of known genes 3557 47.17459 17
Osa09LNT0440200.1 9 Osa09LNG0440200 15975161-15975360 intergenetic lncRNA (lincRNA) 200 52.0 1
Osa09LNT0440100.1 9 Osa09LNG0440100 15978501-15981136 long non-coding(lnc) isoforms of known genes 2427 48.94932 3
Osa09LNT0576200.1 9 Osa09LNG0576200 1606872-1607147 intergenetic lncRNA (lincRNA) 276 27.89855 1
Osa09LNT0576300.1 9 Osa09LNG0576300 1606872-1607147 intergenetic lncRNA (lincRNA) 276 27.89855 1