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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs

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Transcript id Chrom Gene Location Classification Length GC Content(%) Exon Number
Osa09LNT0576500.1 9 Osa09LNG0576500 1608252-1608526 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa09LNT0576400.1 9 Osa09LNG0576400 1608252-1608526 intergenetic lncRNA (lincRNA) 275 26.90909 1
Osa09LNT0426800.2 9 Osa09LNG0426800 1612210-1617510 long non-coding(lnc) isoforms of known genes 2689 47.0807 4
Osa09LNT0426800.1 9 Osa09LNG0426800 1612210-1617510 long non-coding(lnc) isoforms of known genes 1432 55.37709 6
Osa09LNT0582400.1 9 Osa09LNG0582400 16381201-16381474 intergenetic lncRNA (lincRNA) 274 28.10219 1
Osa09LNT0582300.1 9 Osa09LNG0582300 16381201-16381474 intergenetic lncRNA (lincRNA) 274 28.10219 1
Osa09LNT0440300.1 9 Osa09LNG0440300 16422290-16425218 long non-coding(lnc) isoforms of known genes 2390 51.54812 3
Osa09LNT0440400.1 9 Osa09LNG0440400 16556249-16556488 intronic lncRNA 240 34.58333 1
Osa09LNT0582500.1 9 Osa09LNG0582500 16726098-16726404 intergenetic lncRNA (lincRNA) 307 32.89902 1
Osa09LNT0440600.1 9 Osa09LNG0440600 16855394-16860772 long non-coding(lnc) isoforms of known genes 3195 42.19092 11
Osa09LNT0440500.1 9 Osa09LNG0440500 16876404-16876889 intergenetic lncRNA (lincRNA) 486 54.11523 1
Osa09LNT0440700.1 9 Osa09LNG0440700 16883993-16885324 intergenetic lncRNA (lincRNA) 967 50.36194 2
Osa09LNT0440800.1 9 Osa09LNG0440800 16945131-16947984 long non-coding(lnc) isoforms of known genes 1245 45.78313 3
Osa09LNT0440900.2 9 Osa09LNG0440900 16991807-16996017 long non-coding(lnc) isoforms of known genes 2746 45.04734 8
Osa09LNT0440900.1 9 Osa09LNG0440900 16991807-16996017 long non-coding(lnc) isoforms of known genes 2347 46.95356 10
Osa09LNT0441000.1 9 Osa09LNG0441000 17008779-17013718 long non-coding(lnc) isoforms of known genes 1667 43.43131 6
Osa09LNT0441100.1 9 Osa09LNG0441100 17016789-17024125 long non-coding(lnc) isoforms of known genes 3883 48.15864 10
Osa09LNT0441200.1 9 Osa09LNG0441200 17074842-17079624 long non-coding(lnc) isoforms of known genes 1236 51.45631 7
Osa09LNT0582600.1 9 Osa09LNG0582600 17211634-17211878 intergenetic lncRNA (lincRNA) 245 27.34694 1
Osa09LNT0582700.1 9 Osa09LNG0582700 17211945-17212219 intergenetic lncRNA (lincRNA) 275 25.09091 1
Osa09LNT0441400.1 9 Osa09LNG0441400 17252951-17253182 Antisense lncRNA 232 41.37931 1
Osa09LNT0441300.1 9 Osa09LNG0441300 17269254-17269995 intergenetic lncRNA (lincRNA) 742 52.15633 1
Osa09LNT0441500.1 9 Osa09LNG0441500 17567735-17571966 long non-coding(lnc) isoforms of known genes 1412 42.91785 8
Osa09LNT0441600.1 9 Osa09LNG0441600 17569383-17571645 sense lncRNA 2141 44.97898 2
Osa09LNT0441800.1 9 Osa09LNG0441800 17600502-17609104 long non-coding(lnc) isoforms of known genes 3403 52.13047 11